Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0439 ATGGAGAAAGAAAATTTGGACAACCCCAAAACCATCGTTTACGAAACCCTGAGACCCCTTTATCTTTCAACCGCTAGTCAGTCTCCAGTTTCCGATGACCTAGAGCCCTATACTGTTTTCCGCAACGAAATTTCTCTGTCCACCCTCCAATGCGCTTCGCCAGAGACTGCTGCTCCCGATTTCTTTTCTCTCGAAGTTGGCACCGATGATGCCTCTGAGCGAGAGTCCCTCCCTGTTGAATTGCCTGAACCAGTTGCAGCGACTGAGCCCAAGACGCCGGCTCTTGAGTCTGAGCCAAAGCTTGAAAGCGGTTGGTTTCGCGGGAACTGCAAATTCAGGAGTCCCATGCTTCAGCTGCATAAAGAGATAGTAGATTTCTGTGAATTTTTGTCTCCTACTCCAGAAGAAAAAGCTGCACGCGACAAGGCAATTGAATCTGTCTTTGAAGTTATAAAACATATATGGCCTCATTGCCGGGTTGAGGTCTTTGGGTCTTTCAGGACTGGGCTATATCTTCCAACTAGTGATATTGATGTTGTGATTCTGAATGCTGGCTTGCCAAATCCGCAGCTTGGCCTAAATGCACTTTCTCGGGCATTATCACAAAGGGGCATAGCAAAAAATATCCTGGTCATTGGAAAGGCTCGTGTGCCGATTATTAAATTTGTCGAAAAAAGAAGTGGTGTTTCATTTGATATAAGTTTTGATGTTGATAATGGACCGAAGGCTGCTGACTATATTCAGGAAGCAGTGGCTAAATGGCCACCACTGCGGCCTTTATGTTTGATTTTGAAAGTGTTTTTGCAACAAAGAGAGCTTAATGAGGTATTTTCTGGTGGGATTGGATCTTATGCTCTCCTAACCATGCTTATGGCAATGCTACGAAATCTCCGTGGCCAAGCTTCTGGCGAACACAACTTGGGAATCCTTTTGGTGCAATTTTTTGATTTCTATGGACGCAAATTGAACACTGCAGATGTTGGTGTGTCTTGCAGTGGGACAGGCACCTTTTTTGTGAAGAGTAAGAAAGGGTTTCTAAACAAGGGACGGCCAAATCTTATAGCAATTGAGGATCCCCAGGCACCAGAGAACGACATTGGAAAGAACTCTTTTAATTATTTCCAGATTAGGTCAGCTTTTGCAATGGCTTTCACAACATTAACAAATCCCAAGATCATCCTGAGCTTAGGCCCCAACAGAAGTATTCTAGGAACTATAATCAGACCAGACCCTATCTTGCTGGAGCGTAAAGGGGGGTCAAATGGAGAGGTCACTTTTGATACCTTGCTTCCTGGAGCAGGCGAGCCATTACACCTTCAGCATGGAGACCAGGCTATCGTATGCAACTGGCAGTTTGATGATGAAGAAGAACCTCTACCACGGGGAAGAGATGCAGATGGGGATGAAAGCACTTCAGGAAAGAAGAGGAGATCTCCATTTAGGGAAAATCCCAGAAAGAAGCAAAAAGAAAATGGGGATTCTGGGATGGTAAGGAATGAAGAGAATAATCTCTGTGGGAAAGAGAACGGTATAAAGAAGAAAAACCGGAGAAAACCATGGTGA 1563 0.4472 MEKENLDNPKTIVYETLRPLYLSTASQSPVSDDLEPYTVFRNEISLSTLQCASPETAAPDFFSLEVGTDDASERESLPVELPEPVAATEPKTPALESEPKLESGWFRGNCKFRSPMLQLHKEIVDFCEFLSPTPEEKAARDKAIESVFEVIKHIWPHCRVEVFGSFRTGLYLPTSDIDVVILNAGLPNPQLGLNALSRALSQRGIAKNILVIGKARVPIIKFVEKRSGVSFDISFDVDNGPKAADYIQEAVAKWPPLRPLCLILKVFLQQRELNEVFSGGIGSYALLTMLMAMLRNLRGQASGEHNLGILLVQFFDFYGRKLNTADVGVSCSGTGTFFVKSKKGFLNKGRPNLIAIEDPQAPENDIGKNSFNYFQIRSAFAMAFTTLTNPKIILSLGPNRSILGTIIRPDPILLERKGGSNGEVTFDTLLPGAGEPLHLQHGDQAIVCNWQFDDEEEPLPRGRDADGDESTSGKKRRSPFRENPRKKQKENGDSGMVRNEENNLCGKENGIKKKNRRKPW 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0439 520 PANTHER POLY(A) RNA POLYMERASE 103 479 IPR045862 GO:0043631|GO:1990817
Dere08g0439 520 FunFam non-canonical poly(A) RNA polymerase PAPD5 132 240 - -
Dere08g0439 520 Pfam Cid1 family poly A polymerase 306 364 IPR002058 -
Dere08g0439 520 MobiDBLite consensus disorder prediction 456 496 - -
Dere08g0439 520 SUPERFAMILY PAP/OAS1 substrate-binding domain 255 393 - -
Dere08g0439 520 Gene3D - 116 389 - -
Dere08g0439 520 MobiDBLite consensus disorder prediction 456 520 - -
Dere08g0439 520 Gene3D Beta Polymerase, domain 2 132 240 IPR043519 -
Dere08g0439 520 SUPERFAMILY Nucleotidyltransferase 114 267 IPR043519 -
Dere08g0439 520 MobiDBLite consensus disorder prediction 72 98 - -
Dere08g0439 520 FunFam Poly(A) RNA polymerase cid14 233 389 - -
Dere08g0439 520 Pfam Nucleotidyltransferase domain 146 235 IPR002934 GO:0016779
Dere08g0439 520 CDD NT_PAP_TUTase 139 249 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere08g0439 08 6896370 6903130 Dere08g0439 08 6896370 6903130 ECH