Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0426 ATGGCTGCCACTAGCTTGGGAACGCCATGGTGTCTAAGAAGAGCAGCTCAGGCTTTTGCACTTTCTACTTTTCTCCGCAGCAATGGCAAACGCTCTTTCCAGAGGACCATTTGCTCTGATCCTCTCGCCGTTTCTACTTCCTCAGCTTCAGGTGTAAGCCAGACAGTACAAGCTTTAAAGGGAGACGGTGATGTATTACTCAGGGGAGTGGGAGAAAAAAGCACGATAAAAGAAGTAAAGCATATTCTTGAGATGGCTCAACGGGCATCTTCAAGACGAGAAGTTCTTCATACAGATTTTCTTACTCCTCCAGTGCTGAAGGAATCTATGCAAGTAATGGAAAAATTAGCACGTGTGAAAGCAATAGCTCAAGGAGGTTACCCACAGGCTGAACGCTGCCGGATTTCTGTTGGAAATCCGGAAGAACTGACAAGTGATCCAGATATAATTGCAGCATTGAGCATTACAGGAAACTTTCAGTTTGAACCTTGTTCACATGGTGACTTCCTTGGTGCGATCCTTGGTACAGGAATCACCAGGGAGAAACTTGGGGATATAATTTTGCTGGGAGAACAGGGTGCTCAGATACTTATTGTTCCGGAACTTGTTGACTATGTTATGTCATCACTGGGTAAGGTTGGTAATGTTCCAGTATCTTGCAGCCGGATACCATTAATTTCTCTTGATTATGAGCCACCAAGAACCAAATCATTTAAAACCATAGAAGCATCATTAAGAGTGGATGCACTAGCTAGTGCCGGGTTTAAGATTTCACGTTCAAAGCTAGTTGACTTGATCAGCATTGGGGATGTTCGTGTTAATTGGGTCCCTGTTACTACTAAAGGAGCTACGCTCAAGAGTGGAGATATTGTATCTGTTAGTGGAAGGGGAAGATTAAAGATAGGAGAAATAAACTCAACTAAGAAGGGCAAATTTGCAGTGGAGCTCATTCGGTATTTGTAA 963 0.4341 MAATSLGTPWCLRRAAQAFALSTFLRSNGKRSFQRTICSDPLAVSTSSASGVSQTVQALKGDGDVLLRGVGEKSTIKEVKHILEMAQRASSRREVLHTDFLTPPVLKESMQVMEKLARVKAIAQGGYPQAERCRISVGNPEELTSDPDIIAALSITGNFQFEPCSHGDFLGAILGTGITREKLGDIILLGEQGAQILIVPELVDYVMSSLGKVGNVPVSCSRIPLISLDYEPPRTKSFKTIEASLRVDALASAGFKISRSKLVDLISIGDVRVNWVPVTTKGATLKSGDIVSVSGRGRLKIGEINSTKKGKFAVELIRYL 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0426 320 CDD S4 246 300 - -
Dere08g0426 320 NCBIfam photosystem II S4 domain protein 76 318 IPR017506 -
Dere08g0426 320 SUPERFAMILY Alpha-L RNA-binding motif 126 308 - -
Dere08g0426 320 ProSiteProfiles S4 RNA-binding domain profile. 245 305 - -
Dere08g0426 320 Pfam Putative RNA-binding domain in YlmH 151 225 IPR040591 -
Dere08g0426 320 Gene3D - 72 138 - -
Dere08g0426 320 Gene3D - 239 296 IPR036986 GO:0003723
Dere08g0426 320 PANTHER UNCHARACTERIZED 231 319 - -
Dere08g0426 320 Gene3D - 146 228 IPR012677 -
Dere08g0426 320 SMART s4_6 245 302 IPR002942 GO:0003723
Dere08g0426 320 Pfam S4 domain 249 291 IPR002942 GO:0003723
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere08g0426 08 6740302 6745234 Dere08g0426 08 6740302 6745234 ECH