Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0363 ATGATCCTGTCAGCTTCTGACGTGGCAAAATCAGAGCTGCTAATCCACATCAGCGGGACACGTTTGGCAACACACAAACTCAAATCCGCATTATCTGCACACGACACTCGCTCACTTACGCACACGCAGTCACTCAGGCCTCTCCACAGAATAGCCATTGTAAATAAGCATAAAATGGCTTTGCGTCACTCGCTATTAGAACTCCCTCGTTCTCTCTCAAACTTCACACCCAAAAGCGCCCTTCTCAGAAAGCGCTTTTGCTCTGTCTCTGCAATGGCTTCCAATGCTCGAAAGGTTTTGGTTCCGATTGCGAATGGCACGGAGCCTATGGAGGCTGTGATTACGATCGATGTCCTGCGACGATCGGGAGCTGATGTTACCGTTGCTTCTTCCGGGAAGCAGCTTCGGGTCGAAGCTCTGCACGGTGTCAAGATTGTTGCGGATGCTTCTGTTTCTGATGTCGCTGATAGCGTCTTCGACCTAGTCGCTTTACCTGGAGGCGTTCCAGGCGTGGATAATCTTAGAGATTGTGAAGCTCTGGAAAACTTAGTGAAAAAGCAAGTTGCAGATGGACGGCTTTATGCTGCGGTATGTGCTGCTCCTGCCGTGGTACTTGGATCATGGGGTTTGCTCAAGGGGCTGAAGGCAACTTGTCATCCATCATTTATGGAAAAATTGGCCTCTCATGCAACTGCTGTTGAATCAAGAGTGCAGCTGGATGGAAGAGTTGTGACAAGCCGTGCACCAGGGACTACCATGGAGTTTGGTGTTGCACTGGTTGAGCAGTTATACGGAAAAGAGAAGGCTGACGAGGTTGCTGGTCCACTGGTCATGCGATCCAATCATGGGGATGAATATACTTTTACTGAGCTAAACCCTGTTCAATGGACATTTGATAATCCTCCCAAGATTCTTGTACCAATTGCTAATGGCACAGAGGAAATGGAAGCTGTTATGATCATTGATATTCTTTGGAGAGCAAAAGCAGATGTTGTAGTTGCTTCTGTTGAGGACAAATTGGAGATTGTAGCTTCTCGGAAAGTTAAACTGGAGGCTGACATGGTCCTTCATGATGCAGCTAAACTTTCATATGACCTTATTGTGCTGCCAGGTGGACTTGGTGGTGCCCAAGTTTTTGCAAACTCAGAAACCCTGGTCAGCTTGCTGAAAAAGCAAAGAGAATCAAACAGATATTACGGAGCAATTTGTGCATCCCCGGCTTTAGTCTTGGAGCCTCATGGCTTGCTAAAGGGTAAGAAGGCCACGGCTTTTCCTGCCATGTGCAACAAGCTATCAGATCAGAGCGAAGTTGAAAACAGGGTTGTTGTTGATGGCAACCTTATTACCAGCAGAGGACCTGGGACCTCCATGGAGTTTGCATTAGCTATTGTGGAGAAACTTTTTGGGCGCAATGTAGGATTAGAACTTGCAAAAGCGATGGTTTTCACACGCACATAG 1458 0.4733 MILSASDVAKSELLIHISGTRLATHKLKSALSAHDTRSLTHTQSLRPLHRIAIVNKHKMALRHSLLELPRSLSNFTPKSALLRKRFCSVSAMASNARKVLVPIANGTEPMEAVITIDVLRRSGADVTVASSGKQLRVEALHGVKIVADASVSDVADSVFDLVALPGGVPGVDNLRDCEALENLVKKQVADGRLYAAVCAAPAVVLGSWGLLKGLKATCHPSFMEKLASHATAVESRVQLDGRVVTSRAPGTTMEFGVALVEQLYGKEKADEVAGPLVMRSNHGDEYTFTELNPVQWTFDNPPKILVPIANGTEEMEAVMIIDILWRAKADVVVASVEDKLEIVASRKVKLEADMVLHDAAKLSYDLIVLPGGLGGAQVFANSETLVSLLKKQRESNRYYGAICASPALVLEPHGLLKGKKATAFPAMCNKLSDQSEVENRVVVDGNLITSRGPGTSMEFALAIVEKLFGRNVGLELAKAMVFTRT 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0363 485 SUPERFAMILY Class I glutamine amidotransferase-like 301 483 IPR029062 -
Dere08g0363 485 Pfam DJ-1/PfpI family 97 262 IPR002818 -
Dere08g0363 485 Pfam DJ-1/PfpI family 303 465 IPR002818 -
Dere08g0363 485 NCBIfam DJ-1 family protein 98 274 IPR006287 -
Dere08g0363 485 NCBIfam DJ-1 family protein 303 478 IPR006287 -
Dere08g0363 485 FunFam Protein DJ-1 homolog C 91 281 - -
Dere08g0363 485 PANTHER PROTEIN/NUCLEIC ACID DEGLYCASE DJ-1-RELATED 97 276 - -
Dere08g0363 485 SUPERFAMILY Class I glutamine amidotransferase-like 97 280 IPR029062 -
Dere08g0363 485 CDD GATase1_DJ-1 304 467 - -
Dere08g0363 485 FunFam Protein DJ-1 homolog C 296 485 - -
Dere08g0363 485 CDD GATase1_DJ-1 99 263 - -
Dere08g0363 485 Gene3D - 298 485 IPR029062 -
Dere08g0363 485 Gene3D - 90 289 IPR029062 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g0363 Dere-ChrDere08 6119993 6123553 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere08g0363 08 6119993 6123553 Dere08g0363 08 6119993 6123553 ECH