Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0334 ATGAGGAATTACACCCTCTGGTGTGCTTTCATGGCACTTGCTGTCACTTACTCCCTTCAATTTCATGCTCAGGCTGCCCCTGCAGGACCATTGATTAAGCATCTTTCTTCACTCCTCAAATGGACAAGGTCCACCTCTAAGGCGCCTCAATCGGATGGGAATGCTGTTCAATTTGAGAATGGATACGTAGTTGAGACAGTTTTGGAAGGTAACGAGATTGGGGTCGTTCCTTATAGGATTCGTGTCTCTGAGGATGGTGAACTCTTTGCTGTTGATTCAATAAATAGCAACATTGTCAGAATTACTCCGCCATTGTCGCAGTATAGTAGAGGAAGGCTTGTGGCTGGGTCATTTCAGGGTTACACTGGACATGTCGATGGAAAACCAACTGATGCTCGTTTTAATCATCCCAAAGGCATAACCATGGATGATATGGGGAATGTTTATGTTGCCGATACTCAGAATCTAGCCATCAGAAAGATTGGAGATTCTGGTGTGACAACCATTGCTGGAGGAAAGTCAAGTATAGCAGGTTATAGAGATGGCCCCAGTGAAGATGCTAAGTTTTCAAATGATTTTGATGTGGTTTATGTTCGAACAACCTGTTCCTTATTAGTCATTGATAGAGGAAATGCTGCTCTTCGGCAAATTTCCCTTAACCAGGAGGATTGTGATTATCAATATAGTTCAATTTCCACTACAGATATTCTTACAGTAGTTGGTGCTGTCATAGTAGGTTATGCTACATGCATCCTTCAGCAGGGTTTTGGATCCTCGTTCTTCTCAAAGATGCAACGGTCAGAAAGAGAATTCAAAGGCCAAGCTGGCAATGAGAAATCTATGCCCATATTGGGAAGCAGTAAAGAGGAGCCAGGATGGCCATCTTTTGGACAGCTTATCGTTGATCTTTCTAAGCTCTCCGTTGAAGCATTGGCTGGCGCATTCTTTCAATTCATACCCTTGCGTTTAAGATCTGACAGCCCAAGGGGAGGCCTCACTCCATTAAAAGATCGTCTTCGGATGCCCGAAGATGAAGCAGAGCCTCCATTGACTGATAGGCAAGGCGCTCCTGTTCCTGTTGCTGAAAATAGACAGATTCATACACCAAACACAGCTGAGAAGTACTCAGAAATGAAGCCCCCAAAGATAAAATCAAGCAGTTTCAAGGATCCTTCTTTGTCAAGTAAGCACCGTTCATCAAAACGGCAAGAGTATGCTGAATTCTATGGATCTAGTGAGATTCCACCTTACATCAAAACCAAGAGCCAAAAAGAAAGGCCGAGACATTGGCACCGAGAGAAGAGTGGAGAAGTTGTTTATGGTGCAGTTGGAGCAGAGCGAAAACCTGTTGAGATGAGAGCAGTTGATTATGACAATCCAAAGTTTGACCATTATAATATGAGGACTAAGTATATACCTGAGGAGTCCTTCCGTTTCAACCCTCAGTAA 1449 0.4355 MRNYTLWCAFMALAVTYSLQFHAQAAPAGPLIKHLSSLLKWTRSTSKAPQSDGNAVQFENGYVVETVLEGNEIGVVPYRIRVSEDGELFAVDSINSNIVRITPPLSQYSRGRLVAGSFQGYTGHVDGKPTDARFNHPKGITMDDMGNVYVADTQNLAIRKIGDSGVTTIAGGKSSIAGYRDGPSEDAKFSNDFDVVYVRTTCSLLVIDRGNAALRQISLNQEDCDYQYSSISTTDILTVVGAVIVGYATCILQQGFGSSFFSKMQRSEREFKGQAGNEKSMPILGSSKEEPGWPSFGQLIVDLSKLSVEALAGAFFQFIPLRLRSDSPRGGLTPLKDRLRMPEDEAEPPLTDRQGAPVPVAENRQIHTPNTAEKYSEMKPPKIKSSSFKDPSLSSKHRSSKRQEYAEFYGSSEIPPYIKTKSQKERPRHWHREKSGEVVYGAVGAERKPVEMRAVDYDNPKFDHYNMRTKYIPEESFRFNPQ 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0334 482 Pfam NHL repeat 134 160 IPR001258 GO:0005515
Dere08g0334 482 MobiDBLite consensus disorder prediction 331 350 - -
Dere08g0334 482 SUPERFAMILY NHL repeat 73 216 - -
Dere08g0334 482 Gene3D - 40 219 IPR011042 -
Dere08g0334 482 PANTHER - 28 470 - -
Dere08g0334 482 MobiDBLite consensus disorder prediction 327 407 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g0334 Dere-ChrDere08 5792171 5796552 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere08g0334 08 5792171 5796552 Dere08g0334 08 5792171 5796552 ECH