Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0333 ATGAGAAGGGATAATCTTTTTTCCATGTGCTGGAAAAGCTCCTCAAAACACCTCGAACAGGGGATCTCTGGTTTTGCAATGGGTTGTGCAGGATCCTCACAGTCCAAGGCGGAAGGGACGGTAAAAAAGATCCGAAAGCCTAAGCCCTGGAAGCATCCTCAGCCAATAACTAAGACTCAGCTAATGCAGTTACGAGATGAGTTTTGGGACACAGCTCCTCATTATGGTGGCCGTACAGAGATTTGGGATGCTCTTAGAGCTGCTGCTGAGGCTGACCTAACTCTAGCTCAAGCAATTGTGGATAGTGCTGGAGTCATAGTCCAGAGTTCTGATTTGACAGTATGCTATGATGAAAGAGGAGCAAAATATGAACTACCTAAGTATGTATTGAGTGAGCCAACTAACCTGATTAGCGAGAATTAA 423 0.4515 MRRDNLFSMCWKSSSKHLEQGISGFAMGCAGSSQSKAEGTVKKIRKPKPWKHPQPITKTQLMQLRDEFWDTAPHYGGRTEIWDALRAAAEADLTLAQAIVDSAGVIVQSSDLTVCYDERGAKYELPKYVLSEPTNLISEN 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0333 140 Pfam Ubiquitin-binding domain 42 138 IPR032752 -
Dere08g0333 140 Gene3D - 57 130 IPR038169 -
Dere08g0333 140 PANTHER UBIQUITIN DOMAIN CONTAINING 1 PROTEIN-RELATED 27 139 IPR039869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g0333 Dere-ChrDere08 5785755 5792031 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere08g0333 08 5785755 5792031 Dere08g0333 08 5785755 5792031 ECH