Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Dere07g1928 | ATGGCATTTCACGTTGCTTGCCCAATTACATGTCGCCGAATTTGCTTCTGCTCGCTAGGGTTTCCTCGCAGTCTCCATACATCGAAGGCCAAGCATGAGTTCCTGGACGAGGTGGCTAGAATCGAGGAGTTTCTCAGGGACCCATTGGGAATTAGGGTTCAAGCTAGGGAACGGACGGTGCAAGTCGCTGTCCCCAAGGTCGTGCCTCCGCCGCCGGCGGCTCAGCGGCAGTTGCAGGCTGCGGCGGCGGCTGATGGGATTCCCGTTGTTGCTGATGCGGTGGACGAGGCAGTGTCGATTAAGGCCAAAAGGGTCGCACTACAGCGGAAGGGGGCTGCCGCGATGATTGCTGCCGAGGAGTACGCGCGGCAGTTTGAGTCCGGGGATGCTGTGGATGCATGTGGAAATCTTGCTGGAGAAGAACAGGGTCATTTGAATGTCAAAGTCTTTTGCCGGATGTGCAATCGTGTTGAAAATGAAGGAAGTGACAGAGCAAAAAAAATGCTTTCTTGCAAAAGTTGTGGCAAGAAGTACCATAGGAACTGCTTGAGAAGTTGGGCTCAACATAGAGATTTATTTCATTGGAGTTCATGGACTTGTCGTGCTTGCCGAATTTGTGAGGCTTGCAGGAGAACTGGAGATCCAAGTAAGTTCATGTTCTGCAAAAGGTGTGATGGTGCTTACCATTGTTATTGTCTACAGCCTCCTCACAAGAATGTTAGTTCCGGGCCCTATTTATGCCCAAAACACACAAGGTGTCACAGCTGTGGATCCAATGTTCCTGGAAACGGCCTAAGTGTGAGGTGGTTCCTGGGATACACCTGCTGTGATGCGTGTGGAAGATTGTTTGTAAAAGGGAACTACTGTCCTGTTTGTTTGAAGGTCTATAGAGATTCAGAGTCAACACCGATGGTCTGCTGTGATGTTTGCCAGCGTTGGGTGCACTGCCAGTGTGATAATATAAGTGATGAAAAATATCTTCAATTTCAAGTGGATGGGAATTTGCAGTATAAATGTCCCACATGTCGTGGGGAATGTTATCAGGTCAAGGATCTTGAGGATGCTGTTCAAGAACTTTGGAAGAGAAGAGATATTGCTGATAGAGATTTAATTGCCAGCTTGAGGGCTGCGGCTGGTTTACCAACTCAAGAAGAAATATTTTCTATTTCACCATATTCGGATGATGAGGATAGTGAGCCTGTAAAAGCAAAGAGTGAATCTGTGCGTTCCTTTAAGTTCTCTCTGAAGAATTTGTCTGATCACTCACCAAAGAAGACAAAAGATTATGCTAAGAAATGTTCAAGCAAAAAGAATGTTAAGAAAACGGATTATCAGCCTTTTATGACTGGTAGAACTGATCTACATCATAGTTTTGAAGGACATAGTGATGTCAAGTCTTTGCATAGCTTGGATGATGATATCCAGTCCCATGGACATGAAGGTCCTGATGTTTATTCTTCACCTGCTGCTGGAAGCCTGAGCCAAACTGAAGGAACTAGTCATTCTAATCAGCCAGAGACTTTAAAACAGAAGTTTGTAGATGAGGTGATGGTCAGTGATGAAGAGAGAAAACCTAGAGTAGTTCCAATTAAGAGCAATAGGTCACAAACTCTTGATAGTGAAGAGGAGGCTGGAAAAAGTAGTGATAAGACTCGGAATGTCAAAGGGAAGAAGTTGGTTATAAATCTGGGGGCACGGAAAATTAATGTGTCTAATTCTCCACGATCTGATACTTCTAGCTGCCAAAGAGATCAAGATCTGGTTAGCGCGAATGGCAATGAAGATATTGGCCAAGCGAGGAAAGGAGACAAGTTTATGTTTGATAGGCATGATGGCACAGCTAGAAACGTTGATGGTAAATTAAACAGAGTTGACTCGCGTCAATTGAAAGATTTAAAGGTTTCAGCAAGAGAAGGAAATTTTATAAAGCTGGGAAAAATTAAGCCAGAAGTTTCTGAATTGAACCCAGCCTCTGGTAGAGGCAATATTGCTGACGGAAGTGAATCTGGTCTTATAGAGCGACCTCGCATCCTGCTGGGAAAGCGTCGCACTGAGGGTGTGATTGATAAAGATGGAACCATAGGAACTATGTCACAGGGTGAGAGGATATTTTTGGGGAAGCAGTCAGAAGGGAGGTCTGATGCATATGATGATACAGATGACAATACCAATCATTTACCATCACATTCTTTACCGAAAGATTCTAAGCCTTTACTGAGATTTAAATTTAAGAAACCTAGCATTGAAAGTCAAAATTCTCCTCATTGGGAGGATGAGAAGACTACAATCAAGGGACAGAGGTCGAAAAGGAAGAGACCTTCACCTTTTATGGAGAAAGCATCAAATAATGATGAAGAAGATGCAGTGCAATCGCATCAAGATGGTCCAATGGATGAAATCATGGATGCTAATTGGATATTGATGAAATTGGGTAAAGATGCCATTGGAAAGAGAGTTGAAGTTCATCAGACATCTGACAATTCTTGGCATAGGGGATCGGTCACTCATGTAATTGAAGGAACTTCAAAGATATCTGTTACCCTTGAGGATGGGAAAGTGAAGACCTTGGAACTCCGTAAGCAAGGTGTCCGGTTTGTTCCTCAGAAGCAGAAGAGATCAAAAGCTTGA | 2628 | 0.4406 | MAFHVACPITCRRICFCSLGFPRSLHTSKAKHEFLDEVARIEEFLRDPLGIRVQARERTVQVAVPKVVPPPPAAQRQLQAAAAADGIPVVADAVDEAVSIKAKRVALQRKGAAAMIAAEEYARQFESGDAVDACGNLAGEEQGHLNVKVFCRMCNRVENEGSDRAKKMLSCKSCGKKYHRNCLRSWAQHRDLFHWSSWTCRACRICEACRRTGDPSKFMFCKRCDGAYHCYCLQPPHKNVSSGPYLCPKHTRCHSCGSNVPGNGLSVRWFLGYTCCDACGRLFVKGNYCPVCLKVYRDSESTPMVCCDVCQRWVHCQCDNISDEKYLQFQVDGNLQYKCPTCRGECYQVKDLEDAVQELWKRRDIADRDLIASLRAAAGLPTQEEIFSISPYSDDEDSEPVKAKSESVRSFKFSLKNLSDHSPKKTKDYAKKCSSKKNVKKTDYQPFMTGRTDLHHSFEGHSDVKSLHSLDDDIQSHGHEGPDVYSSPAAGSLSQTEGTSHSNQPETLKQKFVDEVMVSDEERKPRVVPIKSNRSQTLDSEEEAGKSSDKTRNVKGKKLVINLGARKINVSNSPRSDTSSCQRDQDLVSANGNEDIGQARKGDKFMFDRHDGTARNVDGKLNRVDSRQLKDLKVSAREGNFIKLGKIKPEVSELNPASGRGNIADGSESGLIERPRILLGKRRTEGVIDKDGTIGTMSQGERIFLGKQSEGRSDAYDDTDDNTNHLPSHSLPKDSKPLLRFKFKKPSIESQNSPHWEDEKTTIKGQRSKRKRPSPFMEKASNNDEEDAVQSHQDGPMDEIMDANWILMKLGKDAIGKRVEVHQTSDNSWHRGSVTHVIEGTSKISVTLEDGKVKTLELRKQGVRFVPQKQKRSKA | 875 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Dere07g1928 | 875 | CDD | PHD_SF | 150 | 203 | - | - | |
| Dere07g1928 | 875 | ProSitePatterns | Zinc finger PHD-type signature. | 151 | 203 | IPR019786 | - | |
| Dere07g1928 | 875 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 283 | 345 | IPR013083 | - | |
| Dere07g1928 | 875 | SMART | PHD_3 | 205 | 251 | IPR001965 | - | |
| Dere07g1928 | 875 | SMART | PHD_3 | 288 | 343 | IPR001965 | - | |
| Dere07g1928 | 875 | SMART | PHD_3 | 150 | 204 | IPR001965 | - | |
| Dere07g1928 | 875 | FunFam | PHD finger family protein | 283 | 345 | - | - | |
| Dere07g1928 | 875 | SUPERFAMILY | FYVE/PHD zinc finger | 146 | 204 | IPR011011 | - | |
| Dere07g1928 | 875 | MobiDBLite | consensus disorder prediction | 488 | 509 | - | - | |
| Dere07g1928 | 875 | MobiDBLite | consensus disorder prediction | 751 | 793 | - | - | |
| Dere07g1928 | 875 | ProSiteProfiles | Zinc finger PHD-type profile. | 286 | 345 | IPR019787 | - | |
| Dere07g1928 | 875 | ProSiteProfiles | Zinc finger PHD-type profile. | 148 | 206 | IPR019787 | - | |
| Dere07g1928 | 875 | PANTHER | HL01030P-RELATED | 101 | 504 | - | - | |
| Dere07g1928 | 875 | MobiDBLite | consensus disorder prediction | 707 | 724 | - | - | |
| Dere07g1928 | 875 | MobiDBLite | consensus disorder prediction | 472 | 604 | - | - | |
| Dere07g1928 | 875 | SUPERFAMILY | FYVE/PHD zinc finger | 286 | 344 | IPR011011 | - | |
| Dere07g1928 | 875 | SUPERFAMILY | FYVE/PHD zinc finger | 195 | 256 | IPR011011 | - | |
| Dere07g1928 | 875 | MobiDBLite | consensus disorder prediction | 536 | 556 | - | - | |
| Dere07g1928 | 875 | FunFam | PHD finger family protein | 145 | 260 | - | - | |
| Dere07g1928 | 875 | MobiDBLite | consensus disorder prediction | 566 | 592 | - | - | |
| Dere07g1928 | 875 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 144 | 260 | IPR013083 | - | |
| Dere07g1928 | 875 | MobiDBLite | consensus disorder prediction | 690 | 796 | - | - | |
| Dere07g1928 | 875 | MobiDBLite | consensus disorder prediction | 513 | 529 | - | - |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Dere07g1928 | 07 | 32292977 | 32301562 | Dere07g1928 | 07 | 32292977 | 32301562 | ECH |