Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g1257 ATGCTGGAAAATATGGCATCCATTGATGCACAGCTGAGGCAACTGGTTCCAGGGAAAGTGAGTGAGGACGACAAACTGGTTGAGTACGACGCTTTGCTCTTGGATAGCTTTCTCTCTATCCTCCAGGATTTGCATGGCATCGATCTCCGGCGAACGGTGCAAGAAGCATATGAGCTTTCTGCAGAGTACGAAGGAAAGCACGACCCTCGGAAACTGGAGGAGCTTGGGAATATGATAACGCGTTTGGACGCAGGGGACTGCATTGTTGTGGCAAAGTCACTCTCCAACATGCTCAACCTCGCAAACCTCGCCGAGGAGGTCCAGATTGCTCACCGGAGAAGGAACAAGATCAAGACGGGGAATTTCGCCGACGAGAATAATGCCACCACTGAGTCTGACATCGAGGAGACTCTCATGAGACTCGTGGGCCAAGTCAACAAGTCTCCTGAAGAAGTTTTCCATGAGCTCAAGAACCAGACTGTTGATCTCGTTCTCACTGCTCATCCCACTCAATCTGTTCGTAGATCTTTGCTTCAAAAATACGCAAGGATAAGGAATTGTTTGACTAAATTTTATGCCAAAGAGATCTCTCCTGATGATAAGCAGGAGCTTGATGAGGCCTTACAGAGGGAGATTCAAGCTGCATTCCGTACAGACGAGATTAGGAGGACCCCTCCAACTCCACAAGACGAGATGAGAGCAGGAATGAGCTACTTTCATGAAACAATCTGGAAGGGTGTTCCCAGATTTCTTCGTCGCGTTGATACAGCTCTGAAGAACATAGGAATTAACCAACGTGTTCCCTATGATGCTCCTCTTATTCAGTTTTCTTCTTGGATGGGCGGTGATCGTGATGGGAATCCAAGGGTGACTCCTGAAGTGACTAGGGATGTTTGCTTATTGGCCAGAATGATGGCTGCGAATTTGTATTATTCACAAATAGAGGACCTTATGTTTGAGCTGTCTATGTGGCGCTGCAGTGACGAGCTAAGTGTCCTTGCGGATGAAATTCACAGGTCTTCCAAGAAAGACGATGTAGCAAAACACTATATAGAGTTCTGGAAAAGAGTTCCGCTAAATGAACCCTATCGTGTAATACTTGGTAATGTAAGGGATAGACTTTATCATACTCGTGAACGTTCTCGCCATTTGCTAGCTCATGGCCATTCTGACATTCCAGAGGATCTAACCTTCACTAATGTTAAGCAGTTCCTGGAACCTCTGGAACTCTGTTACAGATCGCTATGTGCTTGTGGTGACAGAGCAATAGCAGATGGGAGCCTTCTTGATTTGTTGAGGCAAATCACCACTTTTGGACTGTCAATAGTGAGGCTTGATATCAGACAAGAGTCTGATCGTCATAGCGACGTCATGGACGCCATTACAAAACACCTGGAAATCGGCTCCTACCATGAATGGCCTGAAGAAAAGCGACAAGAATGGCTTTTGTCTGAACTGAGCGGCAAACGACCGTTGTTAGGACCGGACCTTCCTCAAACCGAGGAAGTTAAGGATGTTCTGGACACATTTCATGTCATAGCAGAACTTCCCCCTGAGGACTTCGGCGCTTACATCATATCAATGGCCACCGCGCCGTCCGACGTGCTCGCGGTGGAGCTGTTACAGCGCGAATGCCGCGTGAAGCAGCCATTGAGAGTAGTCCCATTGTTCGAGAAGCTTGCAGATCTGGAAGCTGCTCCTGCAGCCTTAGCTCGCTTGTTCTCCAAAGACTGGTACAGAAATCGGATCAAGGGGAAGCAAGAAGTCATGATTGGTTACTCAGATTCTGGTAAAGATGCTGGAAGGTTCACTGCAGCATGGCAGTTGTATAAGGCTCAGGAGGAACTCATAAAGGTGGCGAAGCAATATGGTGTAAAGCTTACCATGTTCCATGGTCGCGGCGGCACCGTCGGACGTGGTGGCGGGCCGACCCATCTCGCCATCCTGTCTCAACCTCCGGACACCATTCATGGATCGCTTCGTGTGACGGTGCAAGGAGAAGTTATAGAGCAATCGTTCGGAGAGCAGAACTTGTGCTTTCGAACCCTACAGCGTTACACTGCTGCTACTTTAGAACACGGAATGCATCCCCCAATCTCCCCAAAACCTGAATGGCGAGCTTTGATGGATCAAATGGCCGCCATTGCTACAGAAGAATACCGTTCTGTTGTGTTCGAAGAGCCTCGTTTTGTCGAGTATTTTCGCCTGGCTACACCGGAATTGGAGTATGGACGGATGAATATCGGAAGCCGACCGGCAAAGCGAAAGCCGAGTGGGGGAATCGAAACGCTGCGTGCGATACCATGGATCTTTGCTTGGACACAGACGAGGTTTCATCTTCCGGTATGGCTTGGCTTCGGGGAAGCATTCAAAAGGGTGATTGAGAAGGACGGTAAGAATCTGCAGATGCTGCGAGAGATGTACACTCAATGGCCTTTCTTTAGGGTCACCATTGATTTAGTGGAAATGGTGTTCGCCAAGGGAGACCCAGGGATTGCTGCACTGTACGACAAGCTTCTTGTTTCTCCGGAGCTGCAGCCATTTGGTGAGCAGTTGAGGACCAAGTATGAAGAAACCAAGAAACTGCTCCTCCAGGTGGCTGGGCACAAGGAAATTCTAGAAGGAGACCCATACTTGAAGCAACGAATCCGTCTGCGAGATTCTTACATCACAACCCTGAATGTTTGCCAAGCGTATACACTGAAAAGTGTGCGAGACCCAAACTACGTGGTGAAGATGCGGCCTCATATCACCAAAGAGGCTGTGGAAATAAGCAAACCTGCTGATGAACTCGTTGCTCTGAACCCAACAAGTGAATACGCCCCTGGTTTGGAAGATACCCTCATTCTCACCATGAAGGGTATTGCTGCTGGCATGCAGAACACTGAACGCACAAACGGGAAAAACAAGAAAAGTTGCGAAATTGCTTTGGGAGGAAGGAAGGAAAAACTGAAAAAAGTTCAAAGAGAATCGAATCGTTTCAGCTTAAGCATACTGAAACAGTTACTCACTCAGCTACAACGCTAA 3027 0.482 MLENMASIDAQLRQLVPGKVSEDDKLVEYDALLLDSFLSILQDLHGIDLRRTVQEAYELSAEYEGKHDPRKLEELGNMITRLDAGDCIVVAKSLSNMLNLANLAEEVQIAHRRRNKIKTGNFADENNATTESDIEETLMRLVGQVNKSPEEVFHELKNQTVDLVLTAHPTQSVRRSLLQKYARIRNCLTKFYAKEISPDDKQELDEALQREIQAAFRTDEIRRTPPTPQDEMRAGMSYFHETIWKGVPRFLRRVDTALKNIGINQRVPYDAPLIQFSSWMGGDRDGNPRVTPEVTRDVCLLARMMAANLYYSQIEDLMFELSMWRCSDELSVLADEIHRSSKKDDVAKHYIEFWKRVPLNEPYRVILGNVRDRLYHTRERSRHLLAHGHSDIPEDLTFTNVKQFLEPLELCYRSLCACGDRAIADGSLLDLLRQITTFGLSIVRLDIRQESDRHSDVMDAITKHLEIGSYHEWPEEKRQEWLLSELSGKRPLLGPDLPQTEEVKDVLDTFHVIAELPPEDFGAYIISMATAPSDVLAVELLQRECRVKQPLRVVPLFEKLADLEAAPAALARLFSKDWYRNRIKGKQEVMIGYSDSGKDAGRFTAAWQLYKAQEELIKVAKQYGVKLTMFHGRGGTVGRGGGPTHLAILSQPPDTIHGSLRVTVQGEVIEQSFGEQNLCFRTLQRYTAATLEHGMHPPISPKPEWRALMDQMAAIATEEYRSVVFEEPRFVEYFRLATPELEYGRMNIGSRPAKRKPSGGIETLRAIPWIFAWTQTRFHLPVWLGFGEAFKRVIEKDGKNLQMLREMYTQWPFFRVTIDLVEMVFAKGDPGIAALYDKLLVSPELQPFGEQLRTKYEETKKLLLQVAGHKEILEGDPYLKQRIRLRDSYITTLNVCQAYTLKSVRDPNYVVKMRPHITKEAVEISKPADELVALNPTSEYAPGLEDTLILTMKGIAAGMQNTERTNGKNKKSCEIALGGRKEKLKKVQRESNRFSLSILKQLLTQLQR 1008
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g1257 1008 Gene3D Phosphoenolpyruvate/pyruvate domain 304 441 - -
Dere07g1257 1008 ProSitePatterns Phosphoenolpyruvate carboxylase active site 1. 164 175 IPR018129 -
Dere07g1257 1008 PRINTS Phosphoenolpyruvate carboxylase signature 629 658 IPR021135 GO:0006099|GO:0008964|GO:0015977
Dere07g1257 1008 PRINTS Phosphoenolpyruvate carboxylase signature 276 291 IPR021135 GO:0006099|GO:0008964|GO:0015977
Dere07g1257 1008 PRINTS Phosphoenolpyruvate carboxylase signature 438 458 IPR021135 GO:0006099|GO:0008964|GO:0015977
Dere07g1257 1008 PRINTS Phosphoenolpyruvate carboxylase signature 216 232 IPR021135 GO:0006099|GO:0008964|GO:0015977
Dere07g1257 1008 PRINTS Phosphoenolpyruvate carboxylase signature 761 787 IPR021135 GO:0006099|GO:0008964|GO:0015977
Dere07g1257 1008 PRINTS Phosphoenolpyruvate carboxylase signature 163 176 IPR021135 GO:0006099|GO:0008964|GO:0015977
Dere07g1257 1008 PRINTS Phosphoenolpyruvate carboxylase signature 587 607 IPR021135 GO:0006099|GO:0008964|GO:0015977
Dere07g1257 1008 Pfam Phosphoenolpyruvate carboxylase 33 962 IPR021135 GO:0006099|GO:0008964|GO:0015977
Dere07g1257 1008 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE 3 962 IPR021135 GO:0006099|GO:0008964|GO:0015977
Dere07g1257 1008 FunFam Phosphoenolpyruvate carboxylase 1 304 441 - -
Dere07g1257 1008 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 29 962 IPR015813 GO:0003824
Dere07g1257 1008 Hamap Phosphoenolpyruvate carboxylase [ppc]. 19 963 IPR022805 GO:0006099|GO:0008964|GO:0015977
Dere07g1257 1008 ProSitePatterns Phosphoenolpyruvate carboxylase active site 2. 589 601 IPR033129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g1257 Dere-ChrDere07 16224078 16233973 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere08g0355 08 6037957 6043581 Dere07g1257 07 16224078 16233973 CCT
Dere07g1257 07 16224078 16233973 Dere08g0620 08 9433491 9438608 CCT