Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g1190 ATGGCTACCACCAACTCTTTCCTCACCACTCCCACCAAAACCCCATCGGGCAAATCGGCTTCCATGTCCAGGACGCATCCGCGCCCCAACTCCATCGATTCTTCCATTTCTCGCTCGTCCTCCAACTCTGATTTTAAGTCTCGATTCGAGGCCTACAATCGACTTCAGGCTGCCGCTGTGGCCTTTGGGGAGAAGCTCCCGATCCCCGAGATCGTTGCCCTTGGCGGCCAGTCTGATGGCAAGAGCTCTCTCCTTGAGGCGCTCCTTGGGTTCCGGTTCAATGTGCGCGAGGTCGAGATGGGTACTCGCAGGCCCCTCATTCTTCAAATGGTTCACGATCCCACTGCTCTGGAACCTCGATGCCGGTTTCAGGAGGAGGATTCAGAAGAGTACGGAAGCCCTGTCGTTTTGGCATCTGCCATTGCAGACATTATAAAGTCTCGAACAGAAGCACTGTTGAAGAAAACTATGACATCAGTATCTCCTAAGCCGATTGTAATGAGAGCAGAATATGCTCATTGTCCTAACCTCACTATTATTGATACTCCCGGCTTTGTTCTTAAGGCAAAGAAGGGAGAACCAGAGAACACTCCTGAAGAAATTCTTTCAATGGTGAAATCGTTGGCTAGTCCTCCCAATCGGATACTCTTGTTCCTTCAGCAAAGTAGTGTGGAGTGGTGCTCATCCTTGTGGTTGGATGCTGTTCGTGACATTGATCCAACCTTTAGGCGGACGGTTATTGTTGTCTCCAAATTTGATAATCGCCTCAAGGAATTCAGTGACCGATGGGAAGTGGATCGTTACTTAAGTGCAAGCGGTTACCTTGGAGATAGCACTCGCCCTTTTTTTGTGGCCCTGCCAAAAGATAGGGGAAATGTTTCAAATGATGAGTTCCGCAGGCAGATTTCTCAGGTGGACTCAGAGGTTCTGCGTCATCTGCGAGATGGTGTCAAGGGTGGTTTTGATGAGGAAAAGTTTAAGCCCTATATTGGTTTTGGCTGTCTGAGAGATTATTTGGAGTCTGAGCTTCAGAAGAAATACAAAGAAGCTGCACCAGCAACTCTAGCATTGCTGGAGCAGCGCTGCAGTGAAGTGACTTCTGAACTTGCTAGAATGGATTCAAAAATTCAGGCCACTTCAGATATTGCTCATCTCAGGAAATCCGCTATGCTATATGCAGCTTCTATCAGCAACCATGTGGGTGCGTTGATTGATGGCGCAGCAGATCCTTCCCCTGAGCAATGGGGGAAAACAACAGCAGAAGAGCGGTCAGAAAGTGGTATTGGGTTTTGGCCTGGGGTCATTGCAGATGTAAAGCCCCCAAATGCTACTCTTCGTCTCTACGGAGGAGCTGCTTTTGAGAGGGTGATGCATGAATTTCGATGTGCTGCATATTCCATTGAATGCCCTCCAGTGTCAAGGGAAAAGGTTGCTAATATATTACTTGCTCATGCTGGGCGAGGTGGGGGAAGAGGTGTAACAGAGGCTGCAGCAGAGATTGCACGTGCTGCTGCTAAATCATGGCTTGCACCTCTTCTTGACACGGCTTGTGATCGGCTTGGTTTTGTTTTGGGAAGTTTATTTGATTTGGCTCTAGAAAGAAATCGCAGTCATGACTCAGAATATGGGAGTGAAACAGGAAACATGGATGGTTATGTTGGTTTTCATGCTGCTTTAAGGCACGCTTATAGTCGCTTCATAAGGGATCTTGCTAAGCAGTCTAAGCAACTAGTCAGGCACCACCTTGATTCAGTTACCAGTCCGTACTCACAGGTCTCCTATGGAAATGACTTTCAACTATGTTATGGCCTAAATGCTACCACTTTTAGGCAGGCTTCTTCTACTTCTTTTTTTCTTGAGTTGAGTGATCCAAAGGTGTCTTCCCACGATGTAATGAGGGATCAGGAAAATATGCCCCCGGAAAATAATGTACAGGAAACAACACCAGGTAAAACTGCAGAAGCTAGAGAAGCTTTGCGAGAAAGCCAGATGACTGTCCCTGAGACGCCGTCTCCTGATCAGCCAGGTGATCCTGTCTATTGTGGGGCTAAAAAGGAGCTTGGAAATTGCAATGACATTGGACCAAGAAAGAGAATGTCAAGAATGACAGGAAATAGCAAAAATTCTGACAATCTGAGAATGCAGAACGGTGGTCTTCCACTGGGAAATGGAGATAGGTCAGGTTCAGCTTACTCAGAAATATGTCTCTCAGCTGCACAGCATTTTGCACGTATACGTGAAGTTCTCGTTGAGAGAGGCGTGGCATCAACTTTAAATTCTGGATTTCTCACCCCTTGCCGAGATCGGCTTCTAGTGGCTTTAGGATTAGATTTGTTCGCTGTGAATGATGAGAAGTTCACGGACATGTTTGTCGCCCCTGGTGCCATAGATGTACTGCAGAATGAACGAGAGTCTCTTCTGAAGCGTCAAAAAATACTCCACTCCTGCTTGAATGAGTTCAGAAATGTTGCTCGGGCACTTTGA 2484 0.4714 MATTNSFLTTPTKTPSGKSASMSRTHPRPNSIDSSISRSSSNSDFKSRFEAYNRLQAAAVAFGEKLPIPEIVALGGQSDGKSSLLEALLGFRFNVREVEMGTRRPLILQMVHDPTALEPRCRFQEEDSEEYGSPVVLASAIADIIKSRTEALLKKTMTSVSPKPIVMRAEYAHCPNLTIIDTPGFVLKAKKGEPENTPEEILSMVKSLASPPNRILLFLQQSSVEWCSSLWLDAVRDIDPTFRRTVIVVSKFDNRLKEFSDRWEVDRYLSASGYLGDSTRPFFVALPKDRGNVSNDEFRRQISQVDSEVLRHLRDGVKGGFDEEKFKPYIGFGCLRDYLESELQKKYKEAAPATLALLEQRCSEVTSELARMDSKIQATSDIAHLRKSAMLYAASISNHVGALIDGAADPSPEQWGKTTAEERSESGIGFWPGVIADVKPPNATLRLYGGAAFERVMHEFRCAAYSIECPPVSREKVANILLAHAGRGGGRGVTEAAAEIARAAAKSWLAPLLDTACDRLGFVLGSLFDLALERNRSHDSEYGSETGNMDGYVGFHAALRHAYSRFIRDLAKQSKQLVRHHLDSVTSPYSQVSYGNDFQLCYGLNATTFRQASSTSFFLELSDPKVSSHDVMRDQENMPPENNVQETTPGKTAEAREALRESQMTVPETPSPDQPGDPVYCGAKKELGNCNDIGPRKRMSRMTGNSKNSDNLRMQNGGLPLGNGDRSGSAYSEICLSAAQHFARIREVLVERGVASTLNSGFLTPCRDRLLVALGLDLFAVNDEKFTDMFVAPGAIDVLQNERESLLKRQKILHSCLNEFRNVARAL 827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g1190 827 PANTHER DYNAMIN 50 820 IPR022812 -
Dere07g1190 827 MobiDBLite consensus disorder prediction 1 42 - -
Dere07g1190 827 Pfam Dynamin family 71 251 IPR045063 -
Dere07g1190 827 MobiDBLite consensus disorder prediction 631 718 - -
Dere07g1190 827 PRINTS Dynamin signature 171 188 IPR022812 -
Dere07g1190 827 PRINTS Dynamin signature 240 256 IPR022812 -
Dere07g1190 827 PRINTS Dynamin signature 93 110 IPR022812 -
Dere07g1190 827 PRINTS Dynamin signature 68 86 IPR022812 -
Dere07g1190 827 SMART dynamin_3 45 288 IPR001401 GO:0003924|GO:0005525
Dere07g1190 827 Coils Coil 355 375 - -
Dere07g1190 827 CDD DLP_1 66 352 IPR001401 GO:0003924|GO:0005525
Dere07g1190 827 Gene3D - 35 400 IPR027417 -
Dere07g1190 827 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 45 360 IPR027417 -
Dere07g1190 827 MobiDBLite consensus disorder prediction 701 716 - -
Dere07g1190 827 FunFam Dynamin-related protein 5A 37 403 - -
Dere07g1190 827 ProSiteProfiles Dynamin-type guanine nucleotide-binding (G) domain profile. 65 352 IPR030381 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g1190 Dere-ChrDere07 15285495 15291196 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere07g1190 07 15285495 15291196 Dere07g1190 07 15285495 15291196 ECH