Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g1071 ATGTGGGTCAGGGTGGGTGTTTCCTTCTATAAATTGTTTACAAAACCATCGAGCAACACACGTTCAAGTAATCTCTCATATATTTCTCAGTTTTCGAAAATGCTGAAGCCTCAGATGATAGGTGAGTCCAGGGGTAGCCATAGCCATAGCTACCTGCTGTATCGGAAGCCATGGGTGAATCTCCATGGGAACAGTAGTTGTGGTGCTCCTCTTGGGGGATGGTCAGTCCAAAACCAGAAGAAACAAAGAAGGTTTAGGGTTAGGTGCAGCAGTAGTGGCAGTGAGAGCAACTTCAAAGCTGTGGCTCTGAGTGAAGCAGAAAACAGTAGCAAGTCAGTGAAGGTGAAAGCCACACTCACGGTTCTGCAAACTGTTGGTGGGTATTTCTCAGAAATTGGTATAAAACGAGGGATCGATGATATAAAGGAAGTACTTGGACGTTCGCTTCTGTTGGAGCTCGCTAGCGCCGAGCTTGATCCCACGACGGGATTAGAGAAACAGACGATCGAGAGTTTCGTTCACAGGACGCATGAAGATGACGACGAGCTGAAGTACGAGGCAGAATTTGAAGTCTCAAAGGGCTTCGGAGAGATAGGAGCCGTGTTCATTGAGAACGAGCACCACGCAGAGATTTTCGTCAAGGACGTGGTGCTCGATGGCTTCATCACTGGTCCCGTTCGCATTTCCTGCAACTCTTGGGTCCACTCCAAGCACACTGATCCCGCTAAGAGAGTGTTTTTCCCCAACAAGTCATACTTGCCATCGGATACTCCGGAGGGAGTAAAGAGGTTAAGGCAAGAAGAATTGGTGAAACTGAGAGGAGACGGACAAGGTGAACGAAAGACCTACGAGAGGATATACGATTACGATGTGTATAACGACCTGGGAGATCCAGACAGCGATATAGATCTCAAGAGACCCGTTCTTGGTGGCAAGCAACATCCGTATCCTAGGCGTTGCAGGACGGGACGTCCTCGCTGTGAAAAAGATCCAATGTCGGAGCAAAGAAGTAGCGAGGTGTATGTGCCGAGGGACGAAGCCTTCTCAGAGGTGAAGCAGCTAACGTTTTCAACGAACACGTTGTACTCGGGGTTGCATGGGCTGGTCCCGGCGCTTCGGACCACCCTCATTGACAAGAATCTTGGCTTTCCTTTGTTCTCTTCCATTGATGATCTTTTCAACGAAGGGGTTAACTTGCCTCCTCTTAAAAACCAAAGCTTTCTCAGGACCCTCTTGCCTAGGCTCCTCAAGCTCATTAGTGACGTCGAGGCAGACATTCTCCGTTTCGAGACTCCCCCTCCAATGGACAGGGACAGGTTCTTTTGGCTTAGGGACGAGGAATTTGCTAGGCAGACTCTTGCAGGTCTCAACCCATGTGCCATACAGTTGGTCACGGAGTGGCCGCTGAAAAGTACACTTGATCCCAAGATTTATGGCCCACAAGAATCTGCAATCACCACGGAGATCATCGAGAGAGAGATAAGAGGTTTTGTCACCATTGAAGAGGCCATAGAACAGAAGAAATTGTTCATCCTAGACTACCATGATCTGTTACTACCATATGTGGAGAAAATCAGAAAACTTGAAGGCACCACTCTATATGGATCTAGGACATTGTTCTTCCTCACCCCAGACGGCACATTGAGGCCCTTGGCTATCGAGCTGACCCGACCACCCATAGACGGCAAGCCACAGTGGAAAGAGGTCTTCACACCCACCTGGCATTCCACTGGTGTTTGGCTATGGAGGCTCGCTAAAGCCCACGTCCTTGCCCATGACTCCGGCTACCACCAACTCGTCAGTCATTGGCTACGAACCCATTGTGCCACGGAACCATACATCATTGCAGCAAACAGGCAACTCAGTGCAATGCACCCAATCTATAGACTTCTGCATCCACATTTCAGGTACACAATGGAGATAAACGCTCTCGCTCGTTTAGCACTCATAAATGCAGGCGGAGTGATTGAGGATAACTTCGCTCCCGGAAAATACTCCATCGAACTCAGCTCCGCCGCCTACGACAAGCAATGGCAATTCAACTTGCAAGCCCTTCCGGCCGACCTCATCCACAGGGGATTAGCAGTGGAAGACCCCAATGCCCCTCATGGCTTGAAGCTAACCATCGAAGACTACCCTTACGCCAACGACGGCCTCGTTCTTTGGGACAATATCAAACAGTGGGTCAGCGACTACGTCAACCGCTACTACCCCGACGCGAGCCTAGTCGAATCCGACTCGGAGCTCCAAGGTTGGTGGGAAGAAATCCGAACCCAAGGCCACGCCGACAAGAAGGACGAGCCATGGTGGCCGGTCCTCAAAACCCCCGCTGATCTCGTGGAAATCGTGACCACTATTGTCTGGATAACGTCGGGTCACCACGCAGCAGTTAACTTCGGGCAGTATGCGTATGCCGGGTATTTCCCGAACCGGCCAACGACAGCGAGATCGAATATGCCTACGGAGGACCCGTCCGACCCGGAATGGGAATTGTTCTTGAACAAACCCGAGCTTGTGCTGCTGAGGACCTTCCCGTCCCAATTGCAGGCGACGACGGTGATGGCAGTGCTGGACATTCTGTCGAGTCACTCGCCGGACGAGGAGTACCTGGGGAATCACATAGAGCCGTCATGGGAGGAGGAACCGATATTAAAAGCGGCGTATGAACAGTTCCAAGGGCGGCTGAAAGAGCTAGAAGGGGTGATTGATATGAGGAATGCAGATAGGAATCTGAGGAACCGAAACGGCGCTGGGGTAATGCCGTATGAGCTTTTGAAGCCGCTTTCTGAGTCTGGAGTTACAGGAAAGGGTGTTCCATACAGTATTTCCATTTGA 2835 0.5076 MWVRVGVSFYKLFTKPSSNTRSSNLSYISQFSKMLKPQMIGESRGSHSHSYLLYRKPWVNLHGNSSCGAPLGGWSVQNQKKQRRFRVRCSSSGSESNFKAVALSEAENSSKSVKVKATLTVLQTVGGYFSEIGIKRGIDDIKEVLGRSLLLELASAELDPTTGLEKQTIESFVHRTHEDDDELKYEAEFEVSKGFGEIGAVFIENEHHAEIFVKDVVLDGFITGPVRISCNSWVHSKHTDPAKRVFFPNKSYLPSDTPEGVKRLRQEELVKLRGDGQGERKTYERIYDYDVYNDLGDPDSDIDLKRPVLGGKQHPYPRRCRTGRPRCEKDPMSEQRSSEVYVPRDEAFSEVKQLTFSTNTLYSGLHGLVPALRTTLIDKNLGFPLFSSIDDLFNEGVNLPPLKNQSFLRTLLPRLLKLISDVEADILRFETPPPMDRDRFFWLRDEEFARQTLAGLNPCAIQLVTEWPLKSTLDPKIYGPQESAITTEIIEREIRGFVTIEEAIEQKKLFILDYHDLLLPYVEKIRKLEGTTLYGSRTLFFLTPDGTLRPLAIELTRPPIDGKPQWKEVFTPTWHSTGVWLWRLAKAHVLAHDSGYHQLVSHWLRTHCATEPYIIAANRQLSAMHPIYRLLHPHFRYTMEINALARLALINAGGVIEDNFAPGKYSIELSSAAYDKQWQFNLQALPADLIHRGLAVEDPNAPHGLKLTIEDYPYANDGLVLWDNIKQWVSDYVNRYYPDASLVESDSELQGWWEEIRTQGHADKKDEPWWPVLKTPADLVEIVTTIVWITSGHHAAVNFGQYAYAGYFPNRPTTARSNMPTEDPSDPEWELFLNKPELVLLRTFPSQLQATTVMAVLDILSSHSPDEEYLGNHIEPSWEEEPILKAAYEQFQGRLKELEGVIDMRNADRNLRNRNGAGVMPYELLKPLSESGVTGKGVPYSISI 944
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g1071 944 PRINTS Lipoxygenase signature 579 596 IPR013819 GO:0016702|GO:0046872
Dere07g1071 944 PRINTS Lipoxygenase signature 617 637 IPR013819 GO:0016702|GO:0046872
Dere07g1071 944 PRINTS Lipoxygenase signature 597 614 IPR013819 GO:0016702|GO:0046872
Dere07g1071 944 MobiDBLite consensus disorder prediction 313 338 - -
Dere07g1071 944 Gene3D - 371 458 IPR027433 -
Dere07g1071 944 CDD PLAT_LH2 113 249 IPR042057 -
Dere07g1071 944 MobiDBLite consensus disorder prediction 321 338 - -
Dere07g1071 944 ProSitePatterns Lipoxygenases iron-binding region signature 2. 624 634 IPR020834 GO:0016702|GO:0046872
Dere07g1071 944 FunFam Lipoxygenase 576 943 - -
Dere07g1071 944 FunFam Lipoxygenase 459 593 - -
Dere07g1071 944 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 251 944 IPR013819 GO:0016702|GO:0046872
Dere07g1071 944 Pfam Lipoxygenase 261 927 IPR013819 GO:0016702|GO:0046872
Dere07g1071 944 SMART LH2_4 113 249 IPR001024 GO:0005515
Dere07g1071 944 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 113 252 IPR036392 GO:0005515
Dere07g1071 944 ProSiteProfiles PLAT domain profile. 128 248 IPR001024 GO:0005515
Dere07g1071 944 SUPERFAMILY Lipoxigenase 253 944 IPR036226 -
Dere07g1071 944 PANTHER LIPOXYGENASE 113 944 IPR000907 GO:0016702|GO:0034440|GO:0046872
Dere07g1071 944 Gene3D PLAT/LH2 domain 113 270 - -
Dere07g1071 944 PRINTS Plant lipoxygenase signature 218 236 IPR001246 GO:0016491
Dere07g1071 944 PRINTS Plant lipoxygenase signature 380 401 IPR001246 GO:0016491
Dere07g1071 944 PRINTS Plant lipoxygenase signature 315 334 IPR001246 GO:0016491
Dere07g1071 944 PRINTS Plant lipoxygenase signature 283 299 IPR001246 GO:0016491
Dere07g1071 944 PRINTS Plant lipoxygenase signature 244 265 IPR001246 GO:0016491
Dere07g1071 944 PRINTS Plant lipoxygenase signature 427 443 IPR001246 GO:0016491
Dere07g1071 944 PRINTS Plant lipoxygenase signature 466 485 IPR001246 GO:0016491
Dere07g1071 944 PRINTS Plant lipoxygenase signature 534 558 IPR001246 GO:0016491
Dere07g1071 944 PRINTS Plant lipoxygenase signature 857 871 IPR001246 GO:0016491
Dere07g1071 944 Pfam PLAT/LH2 domain 168 247 IPR001024 GO:0005515
Dere07g1071 944 Gene3D - 594 942 - -
Dere07g1071 944 Gene3D - 271 368 - -
Dere07g1071 944 ProSitePatterns Lipoxygenases iron-binding region signature 1. 597 611 IPR020833 GO:0016702|GO:0046872
Dere07g1071 944 Gene3D - 459 593 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g1071 Dere-ChrDere07 14114412 14122986 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g1071 195 944 Acyl Lipid Metabolism Gene Families AT3G45140 61.804 0.0 981
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere07g1071 07 14114412 14122986 Dere07g1071 07 14114412 14122986 ECH