Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g1063 ATGTCGTCGTCAACCACCGCAACCACCACTGTCTCCGGTGGCGATTCCTCCGACCACTTTGAAACACCCACATTAGACAGGGAGTGTTCCGGTCTTCTCCAGTCTATTTCTGAGCACGGAGGCTATGCTTTCGTCAGCATGGCAGCTCTGGCCAACGCCGGCGACTTCCGAGCTGCCGAAGCAGCTTGTGATATGGCCTGGGAGCAGCTACACTCGGGGCCTCGGCATTCAGTCCTCCCAGTATGGCGCGACGCCTACTCTTTGGCATGCCTCCACGTTGCGAAGCACCATTATATCAGTGGTGAGTTTAAGGGAGCTCTTAGGGCTTTGGATATGGGATTGATCATGGGTGGAATGCTTCTAAAGAAGGACTTGAACTCTGCTGTTGAGGAAATATTGGAGAAGGCCAGGAACATTACCGCTTCTAAAGAAAGCCAAGAAGGTTCGGGGAAGTCCGAGCATCGACTGGTTAATCACGAACTTAATCAGACTGAGGTGCTCAAACTTCTACCTGTGAACTCCCTTTCCCGTGAAATTGTGATGAAGAGATCTGCTCTGTCATTGGAAAGGTTCCTGAAAGATTATTACCTGACTGGCTCCCCAGTTATCATCAGTGATTGTATGTCTCACTGGCCAGCCAAGACAAAATGGAATGACATAGATTACTTAAAAAGAGTTGCGGGTGATCGTACAGTTCCAGTTGAGGTTGGGAAGAACTATCTATGTGCAGAGTGGAAGCAAGAGTTAATTACTTTCTCCGAGTTTCTTCAGCGGATAGAGTCCGATGGCTGTTCTTCCCTTGGTCCTACATATCTTGCTCAGCATCCATTATTTGATCAGATAAATGAGCTTCGGAAAGATATTTGTATTCCTGACTATTGTTTCGCTGGCGGGGGGAAGTTAAGATCTCTCAATGCTTGGTTTGGTCCTGCCGGGATAGTAACACCATTACACAATGATCCACACCATAACATACTAGCTCAGATTGTTGGGAAGAAATATGTAAGGCTCTACTCTTCATCTCTGTCAAAGGAACTTTACCTCTACACTGAAACCATGCTTGGGAATTCTAGCCAGATTGATCTAGATAACATAGATGAAAGGTTGTTTCCTAAGGTGCAAGACTTGGGATTTGTAGACTGTATACTGGAGGAGGGTGAAATGCTATATATCCCGCAAAATTGGTGGCACTACGTCCGCTCTCTAACTACCAGTTTCTCAGTTAGCTTTTGGTGGAGTGGGGGCGAAAATTCTACTGCATCCTGA 1266 0.4684 MSSSTTATTTVSGGDSSDHFETPTLDRECSGLLQSISEHGGYAFVSMAALANAGDFRAAEAACDMAWEQLHSGPRHSVLPVWRDAYSLACLHVAKHHYISGEFKGALRALDMGLIMGGMLLKKDLNSAVEEILEKARNITASKESQEGSGKSEHRLVNHELNQTEVLKLLPVNSLSREIVMKRSALSLERFLKDYYLTGSPVIISDCMSHWPAKTKWNDIDYLKRVAGDRTVPVEVGKNYLCAEWKQELITFSEFLQRIESDGCSSLGPTYLAQHPLFDQINELRKDICIPDYCFAGGGKLRSLNAWFGPAGIVTPLHNDPHHNILAQIVGKKYVRLYSSSLSKELYLYTETMLGNSSQIDLDNIDERLFPKVQDLGFVDCILEEGEMLYIPQNWWHYVRSLTTSFSVSFWWSGGENSTAS 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g1063 421 PANTHER HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATED 84 415 - -
Dere07g1063 421 ProSiteProfiles JmjC domain profile. 264 421 IPR003347 -
Dere07g1063 421 SMART cupin_9 264 420 IPR003347 -
Dere07g1063 421 Pfam Cupin-like domain 190 413 IPR041667 -
Dere07g1063 421 Gene3D Cupin 179 413 - -
Dere07g1063 421 MobiDBLite consensus disorder prediction 1 22 - -
Dere07g1063 421 SUPERFAMILY Clavaminate synthase-like 184 413 - -
Dere07g1063 421 MobiDBLite consensus disorder prediction 1 19 - -
Dere07g1063 421 FunFam lysine-specific demethylase JMJ30 179 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g1063 Dere-ChrDere07 14043922 14048588 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g1063 174 412 Acyl Lipid Metabolism Gene Families AT3G45880 26.117 4.55e-13 68.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere07g1063 07 14043922 14048588 Dere07g1063 07 14043922 14048588 ECH