Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g1004 ATGTCGGGCGGCTTCTTTCGAGGTACATCTGCGGATCAAGACACTCGGTTTTCGAACAAGCAGGCGAAGCTGCTGAAGTCTCAGAAGTTCGCGCCTGAATTGGACCACCTGGTCGATATGACAAAGGTGAATATGGAAGTAATTAAGCCATGGATAACGAGAAGGGTGACTGAGCTTCTTGGATTCGAGGATGAAGTGCTCATCAACTTTATTCATAGTCTTCTGGATGCGAAGGAAGTAAATGGAAAGGAGGTCCAAATACAAATTACTGGATTTATGGAGAAGAACACTGGAAAGTTTATGAAAGAGCTTTGGACACTTCTTCTCAGTGCACAGAAAAATGCCAGTGGTGTCCCGCAGCAGTTCTTGGATGCCAAAGAAGAAGAACTGAGGAAGAAGAAGGTGCATATGGTTGAAAACGATAAGATAACAAGTGAACTTCAAAAGAAACGAGAGAAGGAAGGTAGAGAATTCACACAAGAGAGGTTGAAGAAAATGGACGGTGGATTTGATGCCAAGGATACTGATACTGCTTCAGACCCAGTCTTGAAGCCCAGGGATTCAGGAGATTACATTCAGGATGGAAAAGAAACTGACAAAAGGAATGGTGTGAGAGCAAGGAACAGGTATTCTAGATCTCCTCATTCCCCTGCAATTTCCACTTCACCTAACCGAGACTCACCTTCTAGGTCAATGACTAAATCATTTTCAAATTCGCGAAGTTATTCAGGACAAAGGTCAAGAAGTATATCCAGGTTGCCAGAAGCACGTGGACGTTCTATTTCATCTGAAAGGATTCTTTGTTCTCCACGAATACAACCTATTTCTCCTCCACCAAGGCATTCACCATGGCGATCTCCTCGTAGAAGGTCATCTTATTCAAGGCGAAGATCTAGATCCCGCTCTCCTTACAGATCACCATCTCTTCGACGTAGAGTGCGTTCTCCATTTCGCCACAGGTCACCCTCTCCTGTGAGAAGACACAGATCACCCTCGCCTGTGAGAAGACGTAGATCGCCCTCGCCAGTGAGAAGACGTAGATCACCCTCGCCAGTGAGAAGACGCAGATCACCTCCTCCTGTGAGATCACCCTCTCCTGTGAGAAGACGCAGATCACCTCCTCCTGTGAGAAGACGTAGATCACCTTCTCCTGTGAGAAGACGCAGATCACCTTCTCCTGTAAGAAGACGCAGATCACCCTCTTCTGTATCACCTTCTCCAGTGAGAAGACGTAGATCCCCTTCTCCTGTGAGAAGACACAGATCACCCTCTCCAGTGCATCGTCGTAGATCACCATCACCTATACAACGACGAAGGTCACTTTCTCCTATGCGCAGAATGTCACCTGTACGTCGTAGATCACCTTCTCCCATGCAATCTACCTCTCCTGTACGCCGCAGGTATAGAAGTAGAACCCCACAAAGTGGGTCCCCATCTCCTGTGGTGCGTAGATCACCTGTTTCAAAACATAAATGGTCTGAGAGTCCTTCGCCAAGGAGGTCTCTTTCTTCAGGCGAGTGGAGTTCCAAGTCCCCCCCAGTTCGAAAAAGTTCTCCAAGACGACCAAGAAGTCCTGTGCAGTTTTCTCAGGGGAGAGTCAGAAAGCAAGGATTGTCACCTGCTGCTCGTCAATCCTCTAGTCCTGTAATGAATGTGCGGAGAGATAAGGATCGCAAGTTGTTGCATGATAAATCACAAGGTTCATTATCCACACCTGAGAAGTCTCCAATTAGGTCAGTATCTCCACAAGCAAGGTATAAAACTAACAATGAAGACGGTAGTCCATATGAGAGCCCTCGCAAGCCAAGAGGGGAGATGTTGACCCGTGAAAGAAGTTTGAGTCCTCCACAGAAACCAAGAATCCAGAAGCCTAGGCATGACAGCCCAGAAACAAGTGAAGGAGTGGAAGAAACATATTATTCTAGAGAGAGCAGGGATCACAAATTAAAGTCGGCACATAAGAAATTGAATTATTTATCTCCTGAGAGTAAGCAGAAAGATTCACATGCAAAGATTCATAATGAGGACAAATTGTCTCCTGATAGGGCAGCTGGCCATCTGGGTTCTGAATCTCGTGGACGTAATGATGGGTATAACTTTCTTGGCAGTGATAAATATTCCAGAAGGGGTCCTGAAACTCCTGCTCAACAGAAGTCACCAATGTTTAAAGAATCTCTTTCTGGTGAGAGGCTTATTGAATCATATGACTTGGGTAGGAAGAAATCTGATGAAAAGAACCACTTGCATTCAAACTTATCCAAGGGTAGTGATCAGCATTGCAAATCAGAAGGTGCTCAATATTCTGTCGGAAAAGTTGATCATGTCAGTCGTAGTGCTTCATATGATTCTGGTTCCGAGGAAAGTGGTAAGCATAGAAGAGATGGAAAGGATAAGAGAAAGCATAAGAGATCTGAGAGAAAGGTTGCTGCTTCAGATGAAGAATTCAGCTATGATTCTGAGTTAGAGGACAGGAAAGAGGCCAAGAGAAGGAAAAAGGAGGAGAGGAGACTGCGAAAGGAGGAGAAGCGTCGAAGGCGTGAGGAGAGACGGCGGAGAAAGGAAGAACGGCGTGCAGAGAAGCTGAAAATGAAGAGTAAAACAGATGACTGTACTTCAGATGATGAAAAAGCTGAAAGAACGGATTCTCATCGAAGTGATAATGAAGAGACACCATCTGAACAGAAGAAGCTTGAGATTGAATTACGAAATAAGGCTCTTGAATCACTTAAAGCAAAGAAGGGCTTGAATCACTAA 2754 0.4524 MSGGFFRGTSADQDTRFSNKQAKLLKSQKFAPELDHLVDMTKVNMEVIKPWITRRVTELLGFEDEVLINFIHSLLDAKEVNGKEVQIQITGFMEKNTGKFMKELWTLLLSAQKNASGVPQQFLDAKEEELRKKKVHMVENDKITSELQKKREKEGREFTQERLKKMDGGFDAKDTDTASDPVLKPRDSGDYIQDGKETDKRNGVRARNRYSRSPHSPAISTSPNRDSPSRSMTKSFSNSRSYSGQRSRSISRLPEARGRSISSERILCSPRIQPISPPPRHSPWRSPRRRSSYSRRRSRSRSPYRSPSLRRRVRSPFRHRSPSPVRRHRSPSPVRRRRSPSPVRRRRSPSPVRRRRSPPPVRSPSPVRRRRSPPPVRRRRSPSPVRRRRSPSPVRRRRSPSSVSPSPVRRRRSPSPVRRHRSPSPVHRRRSPSPIQRRRSLSPMRRMSPVRRRSPSPMQSTSPVRRRYRSRTPQSGSPSPVVRRSPVSKHKWSESPSPRRSLSSGEWSSKSPPVRKSSPRRPRSPVQFSQGRVRKQGLSPAARQSSSPVMNVRRDKDRKLLHDKSQGSLSTPEKSPIRSVSPQARYKTNNEDGSPYESPRKPRGEMLTRERSLSPPQKPRIQKPRHDSPETSEGVEETYYSRESRDHKLKSAHKKLNYLSPESKQKDSHAKIHNEDKLSPDRAAGHLGSESRGRNDGYNFLGSDKYSRRGPETPAQQKSPMFKESLSGERLIESYDLGRKKSDEKNHLHSNLSKGSDQHCKSEGAQYSVGKVDHVSRSASYDSGSEESGKHRRDGKDKRKHKRSERKVAASDEEFSYDSELEDRKEAKRRKKEERRLRKEEKRRRREERRRRKEERRAEKLKMKSKTDDCTSDDEKAERTDSHRSDNEETPSEQKKLEIELRNKALESLKAKKGLNH 917
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g1004 917 MobiDBLite consensus disorder prediction 141 206 - -
Dere07g1004 917 MobiDBLite consensus disorder prediction 453 482 - -
Dere07g1004 917 MobiDBLite consensus disorder prediction 620 647 - -
Dere07g1004 917 MobiDBLite consensus disorder prediction 852 897 - -
Dere07g1004 917 Pfam PWI domain 46 115 IPR002483 GO:0006397
Dere07g1004 917 MobiDBLite consensus disorder prediction 835 851 - -
Dere07g1004 917 MobiDBLite consensus disorder prediction 412 435 - -
Dere07g1004 917 MobiDBLite consensus disorder prediction 550 564 - -
Dere07g1004 917 MobiDBLite consensus disorder prediction 497 515 - -
Dere07g1004 917 MobiDBLite consensus disorder prediction 522 549 - -
Dere07g1004 917 MobiDBLite consensus disorder prediction 653 689 - -
Dere07g1004 917 MobiDBLite consensus disorder prediction 371 395 - -
Dere07g1004 917 MobiDBLite consensus disorder prediction 354 370 - -
Dere07g1004 917 ProSiteProfiles PWI domain profile. 27 125 IPR002483 GO:0006397
Dere07g1004 917 Coils Coil 817 864 - -
Dere07g1004 917 PANTHER SERINE/ARGININE REGULATED NUCLEAR MATRIX PROTEIN 1 389 - -
Dere07g1004 917 SMART pwi_2 40 114 IPR002483 GO:0006397
Dere07g1004 917 MobiDBLite consensus disorder prediction 565 593 - -
Dere07g1004 917 MobiDBLite consensus disorder prediction 806 834 - -
Dere07g1004 917 MobiDBLite consensus disorder prediction 594 608 - -
Dere07g1004 917 MobiDBLite consensus disorder prediction 283 353 - -
Dere07g1004 917 MobiDBLite consensus disorder prediction 141 897 - -
Dere07g1004 917 MobiDBLite consensus disorder prediction 729 756 - -
Dere07g1004 917 MobiDBLite consensus disorder prediction 213 250 - -
Dere07g1004 917 Gene3D PWI domain 33 125 - -
Dere07g1004 917 SUPERFAMILY PWI domain 25 133 IPR036483 GO:0006397
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g1004 Dere-ChrDere07 13532683 13537522 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere07g1004 07 13532683 13537522 Dere07g1004 07 13532683 13537522 ECH