Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0911 ATGTCATCTTTATCGACCTCGTGTTTTCATTCTGATTCTTCTTTTCACTGATTGGTGTTGACTCCATTATCTATGCTCTGCAAGTTTATTGGTTGTCTGGAAACTCTTTATCAAAAATCTTCTCTGAACGGATCTGCTTCAAATCTTCCAGATGGTACTGGGCGGTCTTTTGCCACATCATTCTCTGGTCAGTCTGGTGCTGCCTCCTCGGTTTTTCATCACTCTGGGGCTATTCAGGGACTGCACAACATCCATGGCAGTTTTAATGTTCCCAACATGCCAGGTACACTTGCATCAAGAAATTCAACAATAAATAGCATCCCGTCTGGTGGGGTTCAACAACCTACTGGAAGCCTTTCTAGTGGAAGATTTGCATCAAATAATCTTCCTGTTGCCTTGTCTCAGCTATCTCATGGAGGCTCTCATGGACATTCTGGAGTAACCAATAGAGGAGGTATAAGTGTTGTAGGAAACCCTGGATTTAGTAGTAGCACAAATGGAGTTGGCGGTTCTATTCCTGGGATTCTTCCAACATCTGCTGCAATTGGTAACCGAAATGCTGTACCAGGATTGGGTGTATCCCCAATTTTGGGAAATGCAGGTTCTCGTATTACAAGTTCTATGGGAAACATGGTTGGTGGAGGGAACATTGGGAGGAGCATAAGCTCTGCTGGAGGATTGCCTGTGCCTGGCCTAGGTTCTCGTCTAAATTTAAATGCAAATAGCGTGTCTGGTGGTCTAAGTGTGCAAGGACAGAATCGGTTGATGAGTGGTGTGCTTCCACAAGGATCACCCCAGGTAATTTCAGTGCTAGGAAATTCTTATCCTAGTGCTGGCGGTCCACTTACAAACAATCATGTTCAAGCAGTAAATAATTTGAACTCTATGGGGATGTTGAATGATATGAATTCCAATGACAGCTCTCCTTTTGACATCAATGACTTCCCTCAATTAACAAGTCGACCCAATTCTGCTGGAGGGCCCCAAGGACAGTTGGGTTCTCTAAGAAAACAGGGTCTTGGAGTTAGTCCCATTGTCCAACAAAACCAAGAGTTTAGTATTCAAAATGAAGATTTCCCTGCTTTACCAGGATTTAAAGGTGGTAATGCAGATTATGCTATGGATATGCACCAGAAAGAACAACTTCATGACAATGCTGTGTCCATGATGCAATCTCAGCATTTTTCTATGGGAAGGTCTTCTGGTTTCAGCTTGGGGGGAACATATTCATCACATCGTCCACAGCAGCAACAGCAGCATGCTCCATCAGGCAGTAGTGGTGGTGTCTCCTTTTCATCTGTAAACAATCAGGATCTTCTTCATCTACATGGATCAGATATATTTCCATCATCACATTCAACCTATCATTCGCAGACCAGTGGACCTCCTGGTATTGGATTAAGGCCCCTAAATTCTCCGAATACAGTTTCTGGTATGGGATCATATGACCAGCTCATCCAGCAATATCAACAGCACCAGAACCAGTCCCAGTCCCAGTCCCAGTTTCGCCTTCAACAAATGTCTGCTGCAAATCAGTCTTTTAGGGATCAAGGCATGAAGTCCATGCAAGCTTCCCAATCTACTCTGGATCCATTTGGTTTGCTTGGCTTGTTAAGTGTGATCAGGATGAGTGATCCTGATTTGACATCTCTTGCCCTTGGAATTGATCTTACAACACTTGGGTTAAATTTGAATTCATCAGAAAATCTTCATAAGACTTTTGGGTCTCCGTGGTCTGATGAACCGGCTAAGGGTGATCCAGAGTTCACGGTGCCACAATGTTACTATGCTAAACAGCCACCTGCCCTGCATCAAGGCTATTTTTCAAAGTTTACTGTGGAAACATTATTTTACATATTTTACAGTACGCCCAAAGATGAAGCCCAATTATATGCCGCAAATGAGCTTTATAATAGAGGCTGGTTTTATCACAAAGAACATCGTTTGTGGTTTATAAGAGTTCCCAACATGGAGCCGCTTGTTAAAACAAATGCGTATGAGAGGGGATCTTATCATTGCTTTGATCCAAATACGTTTGAAACAATTCGCAAGGATAATTTTGTTGTTCATTATGAAATGTTGGAAAAAACAACCTCCGTTTCTGCATTGAGGGGGAAGGGAAACTTATGA 2130 0.4277 MSSLSTSCFHSDSSFHXLVLTPLSMLCKFIGCLETLYQKSSLNGSASNLPDGTGRSFATSFSGQSGAASSVFHHSGAIQGLHNIHGSFNVPNMPGTLASRNSTINSIPSGGVQQPTGSLSSGRFASNNLPVALSQLSHGGSHGHSGVTNRGGISVVGNPGFSSSTNGVGGSIPGILPTSAAIGNRNAVPGLGVSPILGNAGSRITSSMGNMVGGGNIGRSISSAGGLPVPGLGSRLNLNANSVSGGLSVQGQNRLMSGVLPQGSPQVISVLGNSYPSAGGPLTNNHVQAVNNLNSMGMLNDMNSNDSSPFDINDFPQLTSRPNSAGGPQGQLGSLRKQGLGVSPIVQQNQEFSIQNEDFPALPGFKGGNADYAMDMHQKEQLHDNAVSMMQSQHFSMGRSSGFSLGGTYSSHRPQQQQQHAPSGSSGGVSFSSVNNQDLLHLHGSDIFPSSHSTYHSQTSGPPGIGLRPLNSPNTVSGMGSYDQLIQQYQQHQNQSQSQSQFRLQQMSAANQSFRDQGMKSMQASQSTLDPFGLLGLLSVIRMSDPDLTSLALGIDLTTLGLNLNSSENLHKTFGSPWSDEPAKGDPEFTVPQCYYAKQPPALHQGYFSKFTVETLFYIFYSTPKDEAQLYAANELYNRGWFYHKEHRLWFIRVPNMEPLVKTNAYERGSYHCFDPNTFETIRKDNFVVHYEMLEKTTSVSALRGKGNL 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0911 709 PANTHER CCR4 NOT-RELATED 78 696 IPR040168 GO:0030015
Dere07g0911 709 MobiDBLite consensus disorder prediction 298 331 - -
Dere07g0911 709 Gene3D - 522 706 IPR038635 -
Dere07g0911 709 MobiDBLite consensus disorder prediction 341 356 - -
Dere07g0911 709 MobiDBLite consensus disorder prediction 447 482 - -
Dere07g0911 709 FunFam probable NOT transcription complex subunit VIP2 isoform X1 522 703 - -
Dere07g0911 709 MobiDBLite consensus disorder prediction 99 123 - -
Dere07g0911 709 MobiDBLite consensus disorder prediction 298 360 - -
Dere07g0911 709 MobiDBLite consensus disorder prediction 392 482 - -
Dere07g0911 709 MobiDBLite consensus disorder prediction 392 440 - -
Dere07g0911 709 Pfam NOT2 / NOT3 / NOT5 family 572 694 IPR007282 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g0911 Dere-ChrDere07 12664538 12670529 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere07g0911 07 12664538 12670529 Dere07g0911 07 12664538 12670529 ECH