Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0880 ATGGCAGCATCACGATTAACCCATTTCCCCCATCATACTATCCGTCAATCTTCATCGTCCGATGTCCCACCGCTCACCACCTTTAAACCCTACGATTCTCATCCGAAACGCTACTGCAGCCTGTCCATTCAGGCTTTACTTCAGGGAGAGAACGACCTAAACAAGAACGCCCAAGCTCTGGACTTGCGAAGAAGCGCCGATGACTTCCCAAGCGACGTCGTCTCCAAAGATATGCTCGCCCTTCCGCGGCCATTGTCTTCAACTCAGTTCTCTGGTTCAGTTTCCGATGGATCTCGTCTTCGTGTAGGATACCAGGGAGTTCGTGGAGCTTACAGTGAGTCTGCGGCGCAGAAGGCCTACCCAAATTGTGAGGCAGTGCCTTGTGATCAATTTGACACCGCTTTTGAAGCTGTTGAAAGGTGGCTTGTGGACAGAGCAGTTTTGCCAATTGAAAATTCTTTAGGAGGGAGCATTCACAGAAACTATGACCTTTTACTCCGCCACAGGTTGCATATCGTAGGAGAAGTAAAATATGCCGTCCGCCATTGTCTGTTGGCCAATCATGGTGTTAAACTTGAGGATTTGAAGCGGGTTCTTAGTCATCCACAGGCTCTTGCTCAGTGTGAGAACACATTGACAAGGTTGGGATTGGTCAGAGAAGCAGTAGATGACACAGCTGGTGCTGCAAAGCATGTTGCTTTCCACAAACTACAAGATGCAGGAGCAGTTGCTAGTTCTGCTGCTGCAGAGATCTATGACTTGAGTATACTCGCTCAAGACATTCAGGATGATAGTGATAATGTCACTCGATTTCTGATGTTAGCACGAGAACCTATTATTCCAGGCACAGATAGGCCATTTAAGACAAGCATAGTTTTTTCTTTAGAGGAGGGTCCTGGGGTACTTTTTAAGGCACTTGCTGTTTTTGCTCTGCGTCAAATTAACCTCACAAAGATTGAGAGTCGTCCATTGCGGAAGCAACCTTTGCGAGCATCTGATGATAACAATAATGGACCCAAGTACTTTGATTATCTTTTTTATGTTGATTTTGAAGCATCAATGGCTGATCAGAATGCACAAAATGCCCTAAGGCATCTTAAGGAGTTTGCCACATTCTTGCGAGTGCTAGGGAGTTATCCAGTGGACATGGCATAA 1155 0.4623 MAASRLTHFPHHTIRQSSSSDVPPLTTFKPYDSHPKRYCSLSIQALLQGENDLNKNAQALDLRRSADDFPSDVVSKDMLALPRPLSSTQFSGSVSDGSRLRVGYQGVRGAYSESAAQKAYPNCEAVPCDQFDTAFEAVERWLVDRAVLPIENSLGGSIHRNYDLLLRHRLHIVGEVKYAVRHCLLANHGVKLEDLKRVLSHPQALAQCENTLTRLGLVREAVDDTAGAAKHVAFHKLQDAGAVASSAAAEIYDLSILAQDIQDDSDNVTRFLMLAREPIIPGTDRPFKTSIVFSLEEGPGVLFKALAVFALRQINLTKIESRPLRKQPLRASDDNNNGPKYFDYLFYVDFEASMADQNAQNALRHLKEFATFLRVLGSYPVDMA 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0880 384 FunFam Arogenate dehydratase 96 183 - -
Dere07g0880 384 Gene3D - 185 264 - -
Dere07g0880 384 SUPERFAMILY Periplasmic binding protein-like II 101 282 - -
Dere07g0880 384 Gene3D - 283 383 - -
Dere07g0880 384 FunFam Arogenate dehydratase 283 383 - -
Dere07g0880 384 Pfam Prephenate dehydratase 102 278 IPR001086 GO:0004664|GO:0009094
Dere07g0880 384 PANTHER PREPHENATE DEHYDRATASE P PROTEIN 51 383 - -
Dere07g0880 384 ProSitePatterns Prephenate dehydratase signature 2. 316 323 IPR018528 GO:0004664|GO:0009094
Dere07g0880 384 ProSiteProfiles Prephenate dehydratase domain profile. 101 276 IPR001086 GO:0004664|GO:0009094
Dere07g0880 384 CDD ACT_CM-PDT 288 380 - -
Dere07g0880 384 FunFam Arogenate dehydratase 184 264 - -
Dere07g0880 384 ProSiteProfiles ACT domain profile. 290 380 IPR002912 -
Dere07g0880 384 Gene3D - 96 184 - -
Dere07g0880 384 CDD PBP2_Ct-PDT_like 101 278 - -
Dere07g0880 384 MobiDBLite consensus disorder prediction 1 25 - -
Dere07g0880 384 ProSitePatterns Prephenate dehydratase signature 1. 252 274 IPR018528 GO:0004664|GO:0009094
Dere07g0880 384 SUPERFAMILY ACT-like 271 381 IPR045865 -
Dere07g0880 384 MobiDBLite consensus disorder prediction 10 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g0880 Dere-ChrDere07 12318029 12321124 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere07g0880 07 12318029 12321124 Dere07g0880 07 12318029 12321124 ECH