LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dere07g0873	ATGTCAGCGTCGCAGAGGATCCTCTTTGCTCTTTCTCACGCTTTCCCTTCTTCACTGCCTCCTATTCCGCCTTCCTCCTCTTTCAAATCTCCATTTTCTCTTTTCCTTCCCTTCTCTCATCCTTACAGGACCCTCGCTCCCTCTACTCTTATCTCTTCTTCAACAATGCCTCGCAATCAGAGAACTGGTGTGTACGAAGAACCCAAGTGGGAACAGAAACCACAAGCTGATGGGAGATCATCAGCTACAGCAGGTGCTTCTGCTGAGGCTGTTACTGACAGACTGGCTGGAATGCATATTGCTGAAAACAGTGGCCAAACCAATGTTCCAGCTGCAACCATACAGTTTGGAGGTATCCAACCTGCTAACCAGTCCACTGTCCATAGTCCAAAGACGGTGTGGAAACCCAAATCCTATGGAACAGTGAGTGGAGCCACTACAGCTAAGGTTGAAGCAGAAGTGGCTTCAGCTAAAAGAAGTACTGCTGATTTGAGTAGGATAAATCTGTTAGAAAATTTTACAGTGGACAACTCCACATACTCAGTTGCACGTATAAGAGCTACTTTCTACCCCAAATTTGAAAATGAAAAGTCAGATCAGGAGATCAGGACAAGGATGATTGAGTTAGTATCTAAAGGTTTGGCTACCTTAGAGGTTTCACTTAAACACTCTGGTTCCCTTTTTATGTATGCTGGCCACAAGGGTGGAGCTTATGCCAAAAACAGCTTTGGAAATATATATACTGCAGTGGGTGTATTTGTCCTTGGACGGATGTTTCGTGAAGCTTGGGGGATTGAAGCGTCAAAAAAACAAGCTGAATTTAATGAGTTTCTTGAGAGAAACCATATGTGCATATCAATGGAACTAGTAACTGCTGTTCTTGGAGACCATGGACAGCGTCCCAATGAAGATTTTGTGGTAGTTACAGCAGTCACTGAACTGGGCAATGGAAAACCAAAGTTCTATTCAACTCCTGAGATAATTGCTTTTTGCAGAAAATGGCGCCTACCTACAAACCATGTGTGGTTGTTTTCAACAAGGAAATCAGTTTCATCCTTTTTTGCTGGCTTTGATGCCTTATGTGAAGAGGGAACTGCAACACCTGTATGTAAAGCTCTTGATGAAATTGCTGATATATCCATACCAGGTTCAAAGGATCATGTAAAAGCCCAAGGTGAAATCTTAGAGGGTCTTGTGGCTCGTGTTGTTACTTGTGAGAGCTCGAACCATATGGAAAATGTTTTAAAAGAATTTCCTCCTCCTCCTGCTGATGGAGTTGGCCTTGATTTTGGACCAAATCTAAGGGAAATTTGTGCTGCAAATAGGTCTAATGAGAAGCAGCAAATAAAAGCCCTTCTTGATAGTGTTGGCAGTTCTTTTTGCCCTGACCACTCAGACTGGTTTGGGCCTGATGGTGCTGATGGTCATTCCAGGAATGCAGACAGATCTGTTCTTTCAAAGTTTTTACAAGCCCATCCTGCAGACTATTCGACTAGGAAATTGCAGGAAATTGTTCGGTTGATGAGAGAAAAACGCTACCCTGCTGCATTCAAATGTTACCATAACTTCCATGAAGTAGATGCTATGGCTCGTGATAACCTTTTCTACAGAATGGTTATTCATGTACACAGTGATTCTGCTTTTCGACGATACCAAAAAGAGATGAGGCATAAACCAGGATTGTGGCCACTATATCGAGGATTTTTTGTGGATATCAATTTATTCAAGGCAATTAGGGAGAGATCCAGTGAAATCTCTACTGGCAACAGTAATGGGGTTGAAAATGGCGCCAGCAGCTCTGAAAATGACTTTGCAGATGAAGATACAAACTTGATGGTCAAATTGAAATTTCTTACATATAAGTTGCGAACCTTTTTGATTCGAAATGGCTTGTCAATTCTGTTTAAAGAAGGTCCAGCTGCTTACAAGGCTTATTACCTTCGGCAAATGAAAATTTGGGGCACCTCTCCAGTAAAGCAGAGAGAACTCAGCAAGATGCTTGATGAATGGGCTGTATATATAAGAAGGAAGTATGGAAATAAACAACTATCATCATCAGTATATCTTAGTGAAGCTGAACCTTTTCTTGAACAGTTTGCTAAACGCAGTCCACAAAACCAAGCTTTAGTAGGTTCTGCTGGCAGTTTAGTAAGAAGTGAAGATTTTATTGCCATCGTTGAGGAAGGCCATGATGAAGAAGGTGATCTTGAGGCTGAGAAGGAAATGCCATCACCAAAGCCTAGTACCTCCGTTACAGATACTGTTGCAAAACAGGAAGGATTGATCATATTTTTTCCTGGAATTCCTGGATGTGCTAAGTCTGCTCTTTGCAAAGAGTTGCTAAATGCTCCAGATGGATTTGGGGATGATCGACCTGTTCATAGTCTCATGGGTGACCTGATTAAAGCAAAGTATTGGCAGAAAGTGGCGGACGAACGCAGGAAGAAACCATATTCTATAATGCTTGCTGACAAGAATGCACCAAATGAAGAAGTTTGGAGACAATTAGAAGACATGTGTCACAAAACTAGAGCCTCGGCTGTTCCAGTTGTGCCTGAATCTGAAGGAACTGACTCAAATCCATATTCCCTTGATGCATTGGCCGTTTTCATGTTTCGTGTGCTTCAACGAGTTAACCATCCAGTATGTTTTGTTGTCTTTCTGGATATACATCAGGGAAATCTTGACGAAGCATCTCCAAATGCTGGATATGTGCTGTTAATGTTTTATCATCTTTATGAGGGCAAGAGTCGTAGAGAATTTGAGGGCGAATTAATTGAGCGTTTTGGGTCGCTTGTCAAGATGCCTTTGTTAAAATCAGATAGGAATCCCCTTCCTCAACCAGTGCAGTCTATCTTGGAGGAGGGCATAAATCTATATAAGCTTCATACCAAGAGACATGGAAGATTGGAGTCTACCAAGGGATCCTATGCAAAGGAATGGACCTCATGGGAGAAACAATTACGGGAGATTCTTTTTGGAAATGCTGAGTATCTTAATTCAATTCAGGTTCCATTTAAGGTTGCTGTCAAGCAAGTCTCGGAACAATTAAGGAAGATTGCTAAGGGTGATTACACACCACCTGACACTGAGAAGAGGAAATTTGGAACCATTGTTTTTGCTGCTCTCAGTCTGTCCGTTACAGAAATTCAAGGAGTCCTTAAGAATATGGCTGCCAACAATCCTTCAGTTGAAGCTTTTCTTAAAGACAAGTATTTAGAGAATCTTCAGAAAGCCCATGTGACTCTTGCCCACAAGAGAAGCCATGGCGTGAAAGCCGTCGCCGATTATGGTGCATTCTTGCATGCAAAGGTCCCCGTGGAGTTGAAAGCTCTGCTCTTCTCAGATAAAATGGCCGCATTTGAAGCATGTCCTGGCTCTGTGGAAGGTGAGAAGATAGTTTCCAAAAACTCATGGCCTCATGCCACCCTATGGACTGCCGAAGGGGTTTCAGCCAAAGAAGCCAACACGTTACCTGAGTTGCTTAAGCAGGGCAAAGCAAGTCGTGTCGACTTAAATCCTCCCATCACTATAACTAGCACAGTAGAGTTTTTCTAA	3558	0.4247	MSASQRILFALSHAFPSSLPPIPPSSSFKSPFSLFLPFSHPYRTLAPSTLISSSTMPRNQRTGVYEEPKWEQKPQADGRSSATAGASAEAVTDRLAGMHIAENSGQTNVPAATIQFGGIQPANQSTVHSPKTVWKPKSYGTVSGATTAKVEAEVASAKRSTADLSRINLLENFTVDNSTYSVARIRATFYPKFENEKSDQEIRTRMIELVSKGLATLEVSLKHSGSLFMYAGHKGGAYAKNSFGNIYTAVGVFVLGRMFREAWGIEASKKQAEFNEFLERNHMCISMELVTAVLGDHGQRPNEDFVVVTAVTELGNGKPKFYSTPEIIAFCRKWRLPTNHVWLFSTRKSVSSFFAGFDALCEEGTATPVCKALDEIADISIPGSKDHVKAQGEILEGLVARVVTCESSNHMENVLKEFPPPPADGVGLDFGPNLREICAANRSNEKQQIKALLDSVGSSFCPDHSDWFGPDGADGHSRNADRSVLSKFLQAHPADYSTRKLQEIVRLMREKRYPAAFKCYHNFHEVDAMARDNLFYRMVIHVHSDSAFRRYQKEMRHKPGLWPLYRGFFVDINLFKAIRERSSEISTGNSNGVENGASSSENDFADEDTNLMVKLKFLTYKLRTFLIRNGLSILFKEGPAAYKAYYLRQMKIWGTSPVKQRELSKMLDEWAVYIRRKYGNKQLSSSVYLSEAEPFLEQFAKRSPQNQALVGSAGSLVRSEDFIAIVEEGHDEEGDLEAEKEMPSPKPSTSVTDTVAKQEGLIIFFPGIPGCAKSALCKELLNAPDGFGDDRPVHSLMGDLIKAKYWQKVADERRKKPYSIMLADKNAPNEEVWRQLEDMCHKTRASAVPVVPESEGTDSNPYSLDALAVFMFRVLQRVNHPVCFVVFLDIHQGNLDEASPNAGYVLLMFYHLYEGKSRREFEGELIERFGSLVKMPLLKSDRNPLPQPVQSILEEGINLYKLHTKRHGRLESTKGSYAKEWTSWEKQLREILFGNAEYLNSIQVPFKVAVKQVSEQLRKIAKGDYTPPDTEKRKFGTIVFAALSLSVTEIQGVLKNMAANNPSVEAFLKDKYLENLQKAHVTLAHKRSHGVKAVADYGAFLHAKVPVELKALLFSDKMAAFEACPGSVEGEKIVSKNSWPHATLWTAEGVSAKEANTLPELLKQGKASRVDLNPPITITSTVEFF	1185

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dere07g0873	1185	MobiDBLite	consensus disorder prediction	732	751	-	-
	Dere07g0873	1185	PANTHER	TRNA LIGASE 1	123	1184	IPR038837	GO:0003972\|GO:0006388
	Dere07g0873	1185	MobiDBLite	consensus disorder prediction	51	88	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dere07g0873	Dere-ChrDere07	12205555	12225683	Dispersed

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Dere07g0873	07	12205555	12225683	Dere07g0873	07	12205555	12225683	ECH