Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0860 ATGATGATGAAGCAATCTGTCTTGTTCTTCTCACTGTCACTACTTCTCGTTTCCCTTCATTATTCCACCACCACCGTAGCCCAATCGCCGGCGGTGGCCCCGGTAAAAGCTGCCCCTGTTTCTCCTCCGGCTGCTGCCCCTGCAGCCTTAGTCCCCACATTACCAGAGTCTCCTTCCGACAACACCCCCGACACTGCCGCCACCGACATCATCGGAATCCTCAGAAAAGCCAAATCGTTCAGCGTCTTCATTCGCCTCCTCAAAATAACCCAACTGATCAACCAAGTCAATTCGCAGCTCATAACCACAAAATCTGGAGGCTTGACCATTCTAGCACCCGATGACTCTGCCTTTTCTGAACTCAAAGCAGGGTTCCTCAACTCGCTCAGCGACGGCCAAAAGCTCGAGCTTTTACAGTTCCACATCCTCCCTAACTATGTGTCAAGCTCCAATTTTGACACTCTGACGAACCCCGTCCGAACCCTGGCCGGAGACAAACCGGGAAGGGTGGACCTCAACGTGATAAGTTATGGTGGGAGCGTGAACATCTCGACAGGGGTGGTGAATACCACGGTGACCGGCATTGTGTATACTGATAAGCGTCTTGCTATATATAAGGTGGGCAAGGTGCTCCTTCCTCTGGACTTCTATGCTGCTAATACACCAGCGGCGGCGCCGGCACTGGCTCCGGCAACCGCGGCGGCAAAGTCACCTAAAGCTGATAAGGATGGGCCCTCGTCAGACGATTCCTCAGATTCATCGCAGGCTATTCCCACTAAGGAAGACTCGGGTGATGTGAGAATGAACGTGGGTGGAATGTGGGTGTCCCTTGGAGTTGCTTTCATGTCTTTATTGACAGTGTAA 864 0.5255 MMMKQSVLFFSLSLLLVSLHYSTTTVAQSPAVAPVKAAPVSPPAAAPAALVPTLPESPSDNTPDTAATDIIGILRKAKSFSVFIRLLKITQLINQVNSQLITTKSGGLTILAPDDSAFSELKAGFLNSLSDGQKLELLQFHILPNYVSSSNFDTLTNPVRTLAGDKPGRVDLNVISYGGSVNISTGVVNTTVTGIVYTDKRLAIYKVGKVLLPLDFYAANTPAAAPALAPATAAAKSPKADKDGPSSDDSSDSSQAIPTKEDSGDVRMNVGGMWVSLGVAFMSLLTV 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0860 287 Gene3D FAS1 domain 48 213 IPR036378 -
Dere07g0860 287 MobiDBLite consensus disorder prediction 235 264 - -
Dere07g0860 287 SMART fasc_3 109 214 IPR000782 -
Dere07g0860 287 FunFam Fasciclin-like arabinogalactan protein 11 53 213 - -
Dere07g0860 287 SUPERFAMILY FAS1 domain 61 214 IPR036378 -
Dere07g0860 287 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 7 257 IPR045003 -
Dere07g0860 287 Pfam Fasciclin domain 79 213 IPR000782 -
Dere07g0860 287 ProSiteProfiles FAS1/BIgH3 domain profile. 67 211 IPR000782 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g0860 Dere-ChrDere07 12085442 12086305 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere07g0860 07 12085442 12086305 Dere07g0860 07 12085442 12086305 ECH