Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0807 ATGTTGTTAGGGAAGTACAGAAATATTCTCATTGTATTCTTGTCTGTACAGAAAAGCATAGGAAATTCCGATTCTGCTTTATTTGGAGAAGAATCGGATGAGATACTTTTACAAGCAAAATATAGGCAAAGCGACCCTTCTAAGATGGGTGATGGATCCACATCCTCATCTGGGGTTTGTGCAAGGCTCACTCGGTGCGAGACAGACTATACGCTACTTTTGGCAACTGAGAAGAAGTGTCTTCATTGGGAATGGCCGGAAAAGCTTCAACGACTACGACAACGTACTCGCCGTCTCCGACCACGCAGAAAACCAAAGCGCCTCTTTTCAATGAAGATTGGGTTCGACCCGATGGTCGCGGCTTCCACCAGTGCAGGCCTGCCTTTTTTAGAACTGGTGCTGTTAATGCTGCCTCTGGATCTGCTTATGCAGAGTTTGGAAATACCAAGATTTGGGCCAAGGGAGAGTAAGAAGGCAATGATGTACAGTGATATAGGGCGTCTAAATTGCAATGTGAGTTTTACAACATTTGCAACTCCAGTTCGTGGCCAGGTATCAGATCACAAAGAGTACACTGCAATGCTTCATAAAGCTTTGGAGGGTTCAATAATGTTGGAAACTTTTCCTAAGACAACTGTGGATGTTTTTGCATTGGTACTGGAATCTGGTGGCAGTGATCTCCCAGTTGTCATATCATGCGCTAGCCTTGCGCTAGCTGATGCTGGAATAATGATGTATGACCTTGTTGCCTCAGTTTCTGTGTCCTGTCTAGGTAAGAACCTTGTTATTGATCCTATTTTGGAGGAGGAAAGCAGTCAAGATGGAAGTTTAATGATAACTTGCATGCCTTCTCGTTATGAAGTTACCCAACTCACTGTTACTGGGGAATGGTCGACCCCAAAGATTAACGAGGGAATGCAGCTGTGCTTAGATGCTTGTGCAAAGCTTGCAAAGATCATGAGGTCCTGTTTGAAAGAAGTTGCTTCAGCTTCCCAAGAATAG 1002 0.4431 MLLGKYRNILIVFLSVQKSIGNSDSALFGEESDEILLQAKYRQSDPSKMGDGSTSSSGVCARLTRCETDYTLLLATEKKCLHWEWPEKLQRLRQRTRRLRPRRKPKRLFSMKIGFDPMVAASTSAGLPFLELVLLMLPLDLLMQSLEIPRFGPRESKKAMMYSDIGRLNCNVSFTTFATPVRGQVSDHKEYTAMLHKALEGSIMLETFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMMYDLVASVSVSCLGKNLVIDPILEEESSQDGSLMITCMPSRYEVTQLTVTGEWSTPKINEGMQLCLDACAKLAKIMRSCLKEVASASQE 333
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0807 333 Pfam 3' exoribonuclease family, domain 1 152 243 IPR001247 -
Dere07g0807 333 PANTHER EXOSOME COMPLEX COMPONENT 151 324 - -
Dere07g0807 333 Pfam 3' exoribonuclease family, domain 2 247 307 IPR015847 -
Dere07g0807 333 SUPERFAMILY Ribosomal protein S5 domain 2-like 158 271 IPR020568 -
Dere07g0807 333 Gene3D - 146 332 IPR027408 -
Dere07g0807 333 CDD RNase_PH_MTR3 151 326 - -
Dere07g0807 333 FunFam Exosome complex component RRP41-like 146 329 - -
Dere07g0807 333 SUPERFAMILY Ribonuclease PH domain 2-like 245 328 IPR036345 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Dere07g0807 Dere-ChrDere07 11521892 11526678 Dispersed/Wgd
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere07g0807 07 11521892 11526678 Dere07g0807 07 11521892 11526678 ECH