Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0733 ATGGATGTAGGTTTCTCACATGGGGCTGTCATAGGCGACTATAACCGCACGGCACTGTCATTCTTATTGAAGCTTGAAGTACGAACACCAGGTAAGGAAGATAGGTGGTCCATGTCAATGGGATCAGAGGAGGAAGGGGTTTCACCAGTTGAATCTCAGAAAGGTACAGTTATTATTAAGGAAGGAGAAGAAGGAGGAAAAGGGAAGGTGAAGAAGGAGGAGGAGGAGGAAGAGTTATGCACGACACCAACTGGTTCAGGCAATCGAATACCAGAGATTCAAAAGTGCCCACCTGCTCCGAGAAAGAGAAGACGATCAGTTGCTTCAGCTTCATCATCATCTTTGCCATTATTGATGATGAGAAGATCATTTACACAGCATGATGAGTTGCACTTCTTCGAGGACACGAGGCTTCAAGAGGTAGAATCTTTCTTCCAATCCATTTCCATGTACGAGGTTTCGAAGAGGTTAATGGCTCCAAAGCGTGCTAAGAAGATCGTGGTCAGATCCACCAGAAAACTTGTGCAGGAAACGGTTCAAGTTGCAGTTGTTAGCAGCAGCAAGAGACCAACCAGAGGGAACAAAGACACCCAGAGAGAGGAAGAAGAAGGAAGCGCTGTAACCCAAGACCATGTGAGAACCATTCCTGTTCGAGAAGTGACTCCTCAAGCCCCACCAGAAAATGCAAGTAACACTAGGGAAGTTACTGAGGGAAAAACAGAGGAAGGGAAAACCCAGACTGGTGAGAAGCGAATAAAGAAAGGGACTGAAGGGAATGATGGTGGGAACAAAGGGATGAAAAGGAAGCGAAAGAGGGGAGGGAGAAGTGGAGAAGGGTACAGGAGGTACGTGTACAGAGTACTGAAGCAGGTGCACCCTGAGATGGGGATTTCGTTTCAGGCCATGACTATTCTGAACAATCTGATGAATGATATGTTTGAGAGGCTTGCGGATGAGGCTGCGAGGCTGAACAAGTACGTGGGGCATATGACATTGTCGCCAAGGGAGATCCAAGGGGCTGTGAAGCTGGTTCTGCCTGGAGAGCTCGGCAGGCATGCCATTGCAGAGGGTGCCAAAGCTGTCACCACTTACATGTCCAACGGTGCTCGTGATTAG 1116 0.4812 MDVGFSHGAVIGDYNRTALSFLLKLEVRTPGKEDRWSMSMGSEEEGVSPVESQKGTVIIKEGEEGGKGKVKKEEEEEELCTTPTGSGNRIPEIQKCPPAPRKRRRSVASASSSSLPLLMMRRSFTQHDELHFFEDTRLQEVESFFQSISMYEVSKRLMAPKRAKKIVVRSTRKLVQETVQVAVVSSSKRPTRGNKDTQREEEEGSAVTQDHVRTIPVREVTPQAPPENASNTREVTEGKTEEGKTQTGEKRIKKGTEGNDGGNKGMKRKRKRGGRSGEGYRRYVYRVLKQVHPEMGISFQAMTILNNLMNDMFERLADEAARLNKYVGHMTLSPREIQGAVKLVLPGELGRHAIAEGAKAVTTYMSNGARD 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0733 371 Pfam Core histone H2A/H2B/H3/H4 233 343 IPR007125 GO:0003677
Dere07g0733 371 MobiDBLite consensus disorder prediction 63 79 - -
Dere07g0733 371 MobiDBLite consensus disorder prediction 192 208 - -
Dere07g0733 371 MobiDBLite consensus disorder prediction 234 264 - -
Dere07g0733 371 SMART h2b3 270 366 IPR000558 GO:0000786|GO:0003677|GO:0030527
Dere07g0733 371 FunFam Histone H2B 237 367 - -
Dere07g0733 371 PANTHER HISTONE H2B 250 366 IPR000558 GO:0000786|GO:0003677|GO:0030527
Dere07g0733 371 MobiDBLite consensus disorder prediction 183 277 - -
Dere07g0733 371 Gene3D Histone, subunit A 230 367 IPR009072 GO:0046982
Dere07g0733 371 PRINTS Histone H2B signature 299 319 IPR000558 GO:0000786|GO:0003677|GO:0030527
Dere07g0733 371 PRINTS Histone H2B signature 338 351 IPR000558 GO:0000786|GO:0003677|GO:0030527
Dere07g0733 371 PRINTS Histone H2B signature 351 364 IPR000558 GO:0000786|GO:0003677|GO:0030527
Dere07g0733 371 PRINTS Histone H2B signature 321 338 IPR000558 GO:0000786|GO:0003677|GO:0030527
Dere07g0733 371 PRINTS Histone H2B signature 280 298 IPR000558 GO:0000786|GO:0003677|GO:0030527
Dere07g0733 371 SUPERFAMILY Histone-fold 257 366 IPR009072 GO:0046982
Dere07g0733 371 MobiDBLite consensus disorder prediction 63 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g0733 Dere-ChrDere07 10739444 10743558 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere07g0733 07 10739444 10743558 Dere07g0733 07 10739444 10743558 ECH