Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0729 ATGCAGCCCAATTTATTTCCCTTTGGAAGCTTACAGGGAAATCCGTTCATATTTAATGGTGATTTGAGTGAGGGGTTTGAGAGCTCTAGGGTTTTCTTCTTAGTTCCTTTCTTGCTCTTCCAAGGAGGGGGAATGGATTTGTCCAAGGTTGGGGAAAAGATCTTGAGCTCCGTTAGGTCTGCGAGATCGCTTGGACTGCTCCCTTCTGTTTCTGATCGGCCTGAGGTTCCAGCTCGAGCTGCTGCTGCTGCAGCTGTTGCTCGTGCTCTTGCAGGATTGCCTCCTCATCAGCGGTATAGTTTCTCATCAAGTTCAGAAGAACTGATTTCTATATATGGAAGCAGAAATCACGGTCAAGTAGTGGAGGAGCTGGAGGATGAATTCTATGAGGAGGAGTTTGATCCAGTTAAATACGTTCTAGAGCATGTTCCTGCTGAAGAAAACGAGCTGGCATATTTTGAGAAGCAGGCTGCCCTTAGATTGGCACAATTGGATAGAGTGGCAGAGCGTCTATCTCGCCATGTTATGGAGCATCATGAAGTAATGGTGAAGGGGATGAATTTGGTTAGGGAGCTGGAAAAAGACTTGAGAATTGCCAATGTAATCTGCATGAATGGAAGAAGACACTTGACCTCATCTATGAATGAAGTTTCCAGGGATCTGATTGTAAATTCCTATTCCAAAAAGAAAAAAGCTCTTCTGGATATGCTTCCCGTCTTGACTGAGCTTCAACGTGCATTGGACATGCAATCAGCACTTGAATCACTTGTTGAGGAAGGGAATTATTGCAAGGCATTTCAAGTTCTATCTGAGTTTTTGCAACTCCTAGATAGTTTGTCAGAACTTTCAGCAATACAAGAGATGAGTCGTGGTGTGGAGGTTTGGCTGGGAAAAACTCTACAAAAGCTGGATGCTCTTTTGTTGGGAGTGTGTCAGGAATTTAAGGAAGATGGCTATATAACTGTAATTGATGCCTATGCATTAATTGGGGATATCACTGGTCTGGCTGAAAAGATACAAAGTTTCTTCATGCAAGAAGTTATCTCAGAAACCCACTCTGTGTTAAAGGCTACTGTGTATGAGGATGAGGAGGCACCTTCGCAAAATAGTAGGCTCACTTACAGTGACTTATGCCTTCAAATATCTGAATCTAAGTTTAGGCAGTGCTTAATAAGAACACTGGCTGTTCTGTTTGAGCTTATGCATTCATACCATGAAATTATGGAGTTTCAGCTGGATAGACAGGACTCAGTAGGCCAAACTTCAAGAAAAGACAATGATGACATTTCCTGTAGTCCAGGTAGGGCTGGGGAAGTTGATGCAGATGTAAGAACATGCAGCAAATCTTTTTCCAGTTGTGGAGATGAAATTTGTGGTTCATCTTCAAGGGAAGAATCTGAAACATCTAGCTCACTGGTTGAAACTACCAACTCTACTCGATTACCTTGTATAGATTCTAATGATCCAGTTAATGAGGCCAGAAAGGATGATAATCCAGCATCAAGCATTGAGTCCCCTTGGTACCATCTGCGCAAAGAAGCTACAGCATTTGTTTCACAAACCCTTCAACGAGGGCGCAAGAATCTTTGGCATCTCACTACAAGCCGTGTTTCAGTATTGCTTTCTTCTGATGCAGCTTGTACTACAAGCATTCACCAATTCTTGAAAAATTATGAAGAACTCAGTGTCTTCATCTTGGCTGGGGAGGCCTTTTGTGGAATTGAAGCAGTTGAGTTCAGGCAGAAGTTGAAGGTGGTTTGTGAAAACTATTTCATAGCTTTTCATCGACAGAATGTTCATGCACTTAAAATGGTTTTGGAGAAGGAGACTTGGTTTAAGTTACCTCCAGATACAGTGCAAATCACCAGCTTCGCTGGACTAGTTGGTGATGGAGCACCTTTGATTTCTTCATCTAACCATAAATCAATTAATGACAGTGCAATTCACTCTGATAGATCAATGAACTTGGTTAACAGTCACACCAGTGTTAGGAAAAGCGGGTTCTCATCTTGGCTTAGCAATGGAAACCCATTTTTGCAGAAATTATCAACCTCTAGAGAAGGCCATTGTTTCCCCCAATCTAATGGATCGACTTATGGTGAATTTGATGGAAATTCAAACAATTTATATGGAGATAAAGTCTTGCCTGGAAAGAATGATTCCAATCAAATAAATGGTGCTAATTCTGTTTCGGAAGATGAAAATGAGGATCTTCTTGCAGACTTTATTGATGAAGATAGTCAACTTCCAAGTCGAAGTTCAAAACCCAATCTTCCAAGAAGAAAATCTCTTCATTGTAATGACGAAGAAAATACAGCACAAACTGGATCTTCTTTAAGTCTTTTAAGATTTATGGATAAATATGCAAGGCTTATGCAGAAATTAGAAGTAATAAACGTTGAATTCTTTAAGGGAATATGCCAATTATATGAGATTTTTTTCTATTTTGTATATGAAACATTTGGTCAACAAAACACTGGTTTAAGTGGAAAAGGCTCAACTGATTCTCTTAATTATCGGCTAAGGACAGCCTTATCCAAAATAACGCAAGATTGTGACCAGTGGATAAAGCCCACGTCATCTTCACCTACTTCTTTAAGTCCATCATTTGTACATTCAGAGTTCACACCTGCTAGCCCTCCCAGCACAAATTTGGGTAACTCATCAGCGACGTCTTTGGGTCTAAAGGAAAGATGTGTGGCTGTTGACACTCTATCACTTGTTGCTCGAATATTGAATAGATCCAAAGCTCATCTCCAATCAATGCTTTTGCAAAGTAATGCAACTGTACTTGAGGATTTCTATTTGCATCTGGTGGATGCTGTACCAGATCTTACAGAGCATATTCATAGGACAACTGCTAGACTACTACTGCACATTAATGGGTATGTTGAACGCATTGCCAATTCTAAATGGGAAGTTAAAGAGCTTGGGCTAGAGCACAATGGGTATGTTGATTTGTTGCTTGGAGAATTTAAGCACTATAAAACACGACTTGTTCATGGGGGAATTCGTCAAGAGATTCAAGACCTACTATTAGACTATGGGCTTGAAATTGTGGCGGAAACTCTTGTAGAAGGACTTTCACGGGTAAAGAGATGTAGTGACGAAGGACGAGCTCTAATGTCGTTGGATCTGCAGGTTTTGATCAATGGGCTGCATCATTTTGTGTCCATGAATGTGAAGCCCAAGCTACAAATGGTTGAAACCTTCATTAAGGCTTACTACCTTCCAGAGACAGAATTTGTTCACTGGGCACGCGCACACCCGGAATTCACTAAAAGTCAGATTATTGGGTTGATAAACCTTGTTGCTTCAATGAAAGGTTGGAAGAGAAAAACCAGGTTGGAAGTATTGGAGAAGATTGAATGA 3372 0.4081 MQPNLFPFGSLQGNPFIFNGDLSEGFESSRVFFLVPFLLFQGGGMDLSKVGEKILSSVRSARSLGLLPSVSDRPEVPARAAAAAAVARALAGLPPHQRYSFSSSSEELISIYGSRNHGQVVEELEDEFYEEEFDPVKYVLEHVPAEENELAYFEKQAALRLAQLDRVAERLSRHVMEHHEVMVKGMNLVRELEKDLRIANVICMNGRRHLTSSMNEVSRDLIVNSYSKKKKALLDMLPVLTELQRALDMQSALESLVEEGNYCKAFQVLSEFLQLLDSLSELSAIQEMSRGVEVWLGKTLQKLDALLLGVCQEFKEDGYITVIDAYALIGDITGLAEKIQSFFMQEVISETHSVLKATVYEDEEAPSQNSRLTYSDLCLQISESKFRQCLIRTLAVLFELMHSYHEIMEFQLDRQDSVGQTSRKDNDDISCSPGRAGEVDADVRTCSKSFSSCGDEICGSSSREESETSSSLVETTNSTRLPCIDSNDPVNEARKDDNPASSIESPWYHLRKEATAFVSQTLQRGRKNLWHLTTSRVSVLLSSDAACTTSIHQFLKNYEELSVFILAGEAFCGIEAVEFRQKLKVVCENYFIAFHRQNVHALKMVLEKETWFKLPPDTVQITSFAGLVGDGAPLISSSNHKSINDSAIHSDRSMNLVNSHTSVRKSGFSSWLSNGNPFLQKLSTSREGHCFPQSNGSTYGEFDGNSNNLYGDKVLPGKNDSNQINGANSVSEDENEDLLADFIDEDSQLPSRSSKPNLPRRKSLHCNDEENTAQTGSSLSLLRFMDKYARLMQKLEVINVEFFKGICQLYEIFFYFVYETFGQQNTGLSGKGSTDSLNYRLRTALSKITQDCDQWIKPTSSSPTSLSPSFVHSEFTPASPPSTNLGNSSATSLGLKERCVAVDTLSLVARILNRSKAHLQSMLLQSNATVLEDFYLHLVDAVPDLTEHIHRTTARLLLHINGYVERIANSKWEVKELGLEHNGYVDLLLGEFKHYKTRLVHGGIRQEIQDLLLDYGLEIVAETLVEGLSRVKRCSDEGRALMSLDLQVLINGLHHFVSMNVKPKLQMVETFIKAYYLPETEFVHWARAHPEFTKSQIIGLINLVASMKGWKRKTRLEVLEKIE 1123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0729 1123 Pfam Vacuolar-sorting protein 54, of GARP complex 121 410 IPR019515 -
Dere07g0729 1123 MobiDBLite consensus disorder prediction 415 431 - -
Dere07g0729 1123 MobiDBLite consensus disorder prediction 710 771 - -
Dere07g0729 1123 MobiDBLite consensus disorder prediction 415 438 - -
Dere07g0729 1123 Pfam Protein of unknown function C-terminus (DUF2451) 893 1123 IPR019514 -
Dere07g0729 1123 MobiDBLite consensus disorder prediction 718 732 - -
Dere07g0729 1123 MobiDBLite consensus disorder prediction 451 485 - -
Dere07g0729 1123 MobiDBLite consensus disorder prediction 451 500 - -
Dere07g0729 1123 PANTHER UNCHARACTERIZED 45 1123 IPR040047 GO:0032456|GO:0042147|GO:1990745
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere07g0729 07 10695042 10722467 Dere07g0729 07 10695042 10722467 ECH