Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0655 ATGTCAACCTTGTCAACTTTTAAGTTTTCCCCACATTGTGAGCTACGAACTGCGAGCCGAAACCAATTCACCAGTGCCATAGTTAAATGTCCATCCTCAATTGGATTCGTGAGGAGTGTTTCCAAATCATTTGGCTTGAAATCATCCCCCTCGTTTAGGGTAACTGCCATGGCTACATACAAGGTTAAGTTGATTGGTCCTGATGGACAAGAGAATGAGTTTGAGGCCCCTGATGATTGCTACATCCTAGATTCAGCAGAGAGTGCTGGAATTGAGCTCCCTTATTCGTGCCGGGCTGGAGCATGCTCCACTTGTGCGGGGAAGATGGTTTCTGGAACAGTAGATCAGTCTGATGGCTCATTCCTTGACGACAGTCAAATGAAGGAAGGTTATCTTCTAACCTGTGTCTCCTATCCAACTTCAGATTGTGTAATTCATACTCACAAGGAAAGCGATCTCTATTGA 465 0.4495 MSTLSTFKFSPHCELRTASRNQFTSAIVKCPSSIGFVRSVSKSFGLKSSPSFRVTAMATYKVKLIGPDGQENEFEAPDDCYILDSAESAGIELPYSCRAGACSTCAGKMVSGTVDQSDGSFLDDSQMKEGYLLTCVSYPTSDCVIHTHKESDLY 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0655 154 Pfam 2Fe-2S iron-sulfur cluster binding domain 67 140 IPR001041 GO:0051536
Dere07g0655 154 NCBIfam ferredoxin [2Fe-2S] 58 154 IPR010241 GO:0009055|GO:0022900|GO:0051537
Dere07g0655 154 ProSitePatterns 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 97 105 IPR006058 GO:0051537
Dere07g0655 154 ProSiteProfiles 2Fe-2S ferredoxin-type iron-sulfur binding domain profile. 60 151 IPR001041 GO:0051536
Dere07g0655 154 PANTHER FERREDOXIN 30 154 - -
Dere07g0655 154 SUPERFAMILY 2Fe-2S ferredoxin-like 55 151 IPR036010 GO:0051536
Dere07g0655 154 Gene3D - 57 154 IPR012675 -
Dere07g0655 154 FunFam Ferredoxin 58 154 - -
Dere07g0655 154 CDD fer2 62 146 IPR001041 GO:0051536
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g0655 Dere-ChrDere07 9663370 9663834 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere07g0655 07 9663370 9663834 Dere07g0655 07 9663370 9663834 ECH