Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0641 ATGGCGATTCTTTACGCTCTGGTGGCGAGAGGTTCGGTGGTGCTGGCGGAGTTCAGCGCGGTCACCGGAAATACAGGCGCCGTGGCTCGCCGGATTCTGGAGAAGCTGCCAGCTGAAGCCGATTCCAGGCTTTGCTTCTCTCAGGATCGTTATATCTTTCACATACTCCGATCCGATGGCCTCACTTACCTCTGCATGGCCAACGACACCTTCGGAAGGAGAATTCCTTTTGCTTACTTGGAAGATATTCAAATGAGGTTTATGAAGAACTATGGCAGAGTGGCCCGTTATGCACCTGCTTATGCAATGAATGACGAGTTTTCAAGGGTTTTGCATCAGCAAATGGAATTTTTTTCAAGTAATTCTAGTGCAGATACCCTGAGCCGTGTGAGGAGTGAAGTTGGTGAGATTCGAACTATCATGGTGGAAAATATTGAGAAAATATTGGAGAGAGGTGACCGGATTGAGCTACTTGTTGATAAGACAGCAACAATGCAAGATAGTGCATTTCACTTTAGGAAACAGTCCAAGCGCCTTCGACGAGCTCTTTGGATGAAAAATGCCAAACTCTTGGCATTATTGACATTCTTGATTGTTCTGTTTCTTTACTTTATAATTGCTGCTTGTTGTGGAGGCATTACTTTACCGTCCTGCAGATCCTGA 663 0.457 MAILYALVARGSVVLAEFSAVTGNTGAVARRILEKLPAEADSRLCFSQDRYIFHILRSDGLTYLCMANDTFGRRIPFAYLEDIQMRFMKNYGRVARYAPAYAMNDEFSRVLHQQMEFFSSNSSADTLSRVRSEVGEIRTIMVENIEKILERGDRIELLVDKTATMQDSAFHFRKQSKRLRRALWMKNAKLLALLTFLIVLFLYFIIAACCGGITLPSCRS 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0641 220 SUPERFAMILY SNARE fusion complex 121 187 - -
Dere07g0641 220 Pfam Regulated-SNARE-like domain 29 108 IPR010908 -
Dere07g0641 220 CDD R-SNARE 125 184 - -
Dere07g0641 220 FunFam Vesicle-associated membrane protein 7 124 209 - -
Dere07g0641 220 Gene3D Longin domain 1 124 - -
Dere07g0641 220 Gene3D - 125 209 - -
Dere07g0641 220 Pfam Synaptobrevin 124 211 IPR042855 -
Dere07g0641 220 CDD Longin 4 118 IPR010908 -
Dere07g0641 220 PANTHER SNARE PROTEINS 1 206 - -
Dere07g0641 220 SUPERFAMILY SNARE-like 3 118 IPR011012 -
Dere07g0641 220 ProSitePatterns Synaptobrevin signature. 144 163 IPR001388 GO:0016020|GO:0016192
Dere07g0641 220 FunFam Vesicle-associated membrane protein 714 1 124 - -
Dere07g0641 220 ProSiteProfiles v-SNARE coiled-coil homology domain profile. 126 186 IPR042855 -
Dere07g0641 220 SMART Longin_2 28 110 IPR010908 -
Dere07g0641 220 ProSiteProfiles Longin domain profile. 7 111 IPR010908 -
Dere07g0641 220 PRINTS Synaptobrevin signature 131 150 IPR001388 GO:0016020|GO:0016192
Dere07g0641 220 PRINTS Synaptobrevin signature 151 170 IPR001388 GO:0016020|GO:0016192
Dere07g0641 220 PRINTS Synaptobrevin signature 187 206 IPR001388 GO:0016020|GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g0641 Dere-ChrDere07 9495290 9499208 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g0641 1 220 Miscellaneous Gene Families AT5G22360 85.068 1.43e-141 392
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere07g0641 07 9495290 9499208 Dere07g0641 07 9495290 9499208 ECH