Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0535 ATGGAACATCTATTAAACAATAATAAGGGGAGGTCGTCCTTTCGTCTTTCGCTGTGGCTCGTTTTCGGTATCTTGATCCTCTCTCTCTATTCTCTACTCTCGTTTGGTGAGAAATTTCCGTTCATCCTTTCCCAATTAATTGTTGCCATGGCTAAGAGTTCATTCAAGATGGAACACCCCCTTGAGAGGAGACAGGCTGAAGCTGCTCGCATAAGAGAAAAGTATCCCGACAGAATTCCAGTGATCGTTGAAAAGGCTGAAAAGAGTGATGTTCCTGAAATTGATAAGAAAAAGTATCTAGTTCCTGCTGATCTGACTGTTGGACAGTTTGTATATGTTGTGAGAAAGAGAATCAAGCTGAGTCCTGAGAAGGCCATCTTTATTTTTGTCAAAAATATTTTACCCCCAACTGCGGCTATGATGTCTGCAATTTATGAGGAAAACAAGGATGAAGATGGGTTCCTGTATATGACTTACAGTGGGGAGAACACATTTGGAATGATCTGA 507 0.4103 MEHLLNNNKGRSSFRLSLWLVFGILILSLYSLLSFGEKFPFILSQLIVAMAKSSFKMEHPLERRQAEAARIREKYPDRIPVIVEKAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFGMI 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0535 168 FunFam Autophagy-related protein 50 166 - -
Dere07g0535 168 Gene3D - 43 167 - -
Dere07g0535 168 SUPERFAMILY Ubiquitin-like 52 166 IPR029071 -
Dere07g0535 168 Pfam Autophagy protein Atg8 ubiquitin like 63 166 IPR004241 -
Dere07g0535 168 PANTHER MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATED 52 167 IPR004241 -
Dere07g0535 168 CDD Ubl_ATG8 61 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g0535 Dere-ChrDere07 8360033 8362979 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere07g0535 07 8360033 8362979 Dere07g0535 07 8360033 8362979 ECH