Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0532 ATGGATTCCATCACTTCCGTTTCAACTTCACTTGGTTTTATTTGTTCCGGTGATGGAATTGGAAGCCATAAACACTTCTTCACATGTTCCTTTGTGCGATGTCAGCATATCATTTTGCCACATAAGCCCACACCCGCCCCCTGCAAGCGCCAGTTAGACACCGCCGCCGGTAATGATCACAGCCTCCGATCGTGTTTCTGCATAAAATCAGAGCTGGTCGAAGAAGAAGAAAAGAGAAATAAAATGGGATATGGATACAAGATGGGAGTGGCGTTCGCGATCGCTTCTTTAGCAGCTATCTCAATCTACTTCACTGCTCGGTACCGGAGTCGGCGTAAGCAAAAGTCTCGTCGAAGTTTATGTTACTTACATGCGGAACCAAAGCCACAGTATGCCTTTAAGCGGGTTTTAGCGGATAACTCGTACGCTGCGTTCAAGCACTTGAAGCGCCACGACTCTAGCGATGAGAATCCTTCAAATTCCCATCCTTTTGAGGCAGAGATTACAGCATTGTTAAAAAACCCTCAACTTCAATTAGAATTTAGTACTGAGATTGAGGAATTGAAGAAGAAAGATACATATGTTTGGATTGAGACAGAGTTGCAATTAAAGGAACTGGTCAATGTATTGAATAAAGAGAAGTTCTTTGCTGTTGACACAGAACAACATACCTTACGATCTTTTCTAGGCTTTACAGCATTAGTTCAGATCTCTACTCAGCAGGAAGATTATTTGATTGACCCTATTGCCCTGCATGATTTAATGGGCATTCTCTGCCCAGTTTTTGCAAATCCTTTAATTTGTAAAGTATTTCATGGAGCTGACAATGATATTGTCTGGCTACAGAGAGATTTCCATATATACGTTGTTAATCTATTTGATACTTCAAAGGCATGTGAGGTGCTGTCAAAACCACAGAAATCACTCGTTTATTTACTGGAAACTTATTGTGGTGTCACAACAAATAAATTATTTCAGCGTGAAGACTGGAGACAACGCCCCCTTACAGGAGCAATGGTGCATTATGCACGAACAGATGCACACTATTTGTTATATATTGCAAATTGTTTGATCACTGAGCTCAAACAACTGGATGATGAAAACTCTTGTTCCGATGACAAATTCCATTTTCTTCACGAGGCCAGTAGGCGTTCAAACATGATTTGTTTGCAACTTTTCACAAAAGAAATTGAAGCTTCTCCTGGAGAATCTGCTGCGTTATCATTATTTTCACGTCATGTGAGCAGTGAAAGTTGCCCATCAGTTTCCAATGAAACTAAGTTTCAGAATTTTGTGAGGCGACTATGTGCATGGAGAGATCTAATGGCTCGTGTCCATGATGAGAGCTTAAAATATGTTTTACCAGACCAGGCAATTGTTGCTTTGGCAAATCAGCCTCCAACAAGTCACTTTGAAATATACAATGTCATAGCTCAGGCTGATATCAATGTGGAAATGGGTGTCAATTCTTTTTTCTCTGTTCCATCTCCTATTGTTGGCAGCCACCTAAGTGATGTCTATGATTTGCTTTCAAACAATTTGGGTGATACTGGAGATATTTATTCTATCATTCTTCAGAAGTGCCTGGGTCCAAATGGGAGTTGCCCAATTTCTATGTTTAACTATTCGTTGTTGGTTAGCAGTAACCTGAGACCTACTATAGCCTTTAAACACAGCAGTGTAAAAAATTCAAAACAAGTTTCTCGGAAGACTTCTCGAGATTTGTTTGTCCAGAAATTCTCTTGTAAATCTCCTGTTTATCATAATTGTCGGATCTATGCTAATGACGGTCGGATGCTTTGTTACTGTGATCGGAGGAAGCTTGAATGGTACCTCAATCGGGATCTGGCAAAACTAATTGATGAAGATCCACTGGCTATTATGCTTCTTTTCGAACCAAAAGGTCGTCCAGAGGATGAAGACAACGATTTTTATATCCAGAGTAAGAAAAACATATGTGTCGGGTGTGGTGAAGGAAATCACTACTTGCGGTACCGAATAATCCCATCATGTTATAGAATGCATTTTCCTGAGCATTTGAAAAGCCATCGTTCTCATGATATTGTCCTACTTTGTGTGGACTGTCATGAAGTTGCCCATGCTGCTGCAGAGAAATATAAGAGAAAGGTAGCAGCTGAATTTGGAATTCCTCTCTATGTTCGTAAGGTAATTGATCCAGGACAAGTGTCTGAAGTAAGCTTTGAAGAGGGAGGTGTTTCTCCATTACAATTGCGAACAGCTGCCATGGCTCTTCTGCGCCATGGATCAAGAATGCCTCCCAATCGCCATGATGAACTAACCAAGATTGTGAAGAGATATTATGGAGGAAGGGAGATATCTGAGGAAGATTTGGAAAGAGCTCTGCTAGTTGGCATGAGTCCTCATGAGAGACGACGGTTTGAGAAGAAGCGAGGTTACTCATTCAAACATTCTTTAAGAAGTACTGCTGCGGAGTTAGTACAGGAAAATCATGGTGACTGCACACCCAGAACGGGAAATGTGGACACATCAAATATTAATGTTCTAGATGGTTCACATGCAACCAAAGCAACAAGCAATGGAGAAGATAGTGAACTTGTTATGGTAAAGGATGATGTAGGAAACCCCTCTGTAGCTTCTGATCTAGCAATTGACGGAGCTGTATCTACTGTCTTAACTGAACATATGAGCACAGATAAAACTATAGGTTCCCATGAGAACAGTGTCTCTGCCGTAAACGCTGATGATAGTTGTCTGAGTACAAGGCCGGCAATTGAAGTTAATGACTTATCCCAGGGAGATGAAGAGTCCACTCAAGCGAAACATAATCCAAAACTATCACTCTTAGGACACGGACCACATGGGAAGCAAGTTGTTGAACATTTACTGAAGGAATATGGTGAGGATGGCATTCGTCTGTTTTGTCAAAGATGGAGACAAGCTTTTGTTGAAGCTGTCAAACCACATTTTCTACCGGCTGGCTGGGACATAAAACACAGTGGTAGAAGGGACTTCGGTGAATTCAGTGTTTACAATCCGGTCAGAAAAGCATCCTCTGCTACTGCTACTAGCTAG 3054 0.4129 MDSITSVSTSLGFICSGDGIGSHKHFFTCSFVRCQHIILPHKPTPAPCKRQLDTAAGNDHSLRSCFCIKSELVEEEEKRNKMGYGYKMGVAFAIASLAAISIYFTARYRSRRKQKSRRSLCYLHAEPKPQYAFKRVLADNSYAAFKHLKRHDSSDENPSNSHPFEAEITALLKNPQLQLEFSTEIEELKKKDTYVWIETELQLKELVNVLNKEKFFAVDTEQHTLRSFLGFTALVQISTQQEDYLIDPIALHDLMGILCPVFANPLICKVFHGADNDIVWLQRDFHIYVVNLFDTSKACEVLSKPQKSLVYLLETYCGVTTNKLFQREDWRQRPLTGAMVHYARTDAHYLLYIANCLITELKQLDDENSCSDDKFHFLHEASRRSNMICLQLFTKEIEASPGESAALSLFSRHVSSESCPSVSNETKFQNFVRRLCAWRDLMARVHDESLKYVLPDQAIVALANQPPTSHFEIYNVIAQADINVEMGVNSFFSVPSPIVGSHLSDVYDLLSNNLGDTGDIYSIILQKCLGPNGSCPISMFNYSLLVSSNLRPTIAFKHSSVKNSKQVSRKTSRDLFVQKFSCKSPVYHNCRIYANDGRMLCYCDRRKLEWYLNRDLAKLIDEDPLAIMLLFEPKGRPEDEDNDFYIQSKKNICVGCGEGNHYLRYRIIPSCYRMHFPEHLKSHRSHDIVLLCVDCHEVAHAAAEKYKRKVAAEFGIPLYVRKVIDPGQVSEVSFEEGGVSPLQLRTAAMALLRHGSRMPPNRHDELTKIVKRYYGGREISEEDLERALLVGMSPHERRRFEKKRGYSFKHSLRSTAAELVQENHGDCTPRTGNVDTSNINVLDGSHATKATSNGEDSELVMVKDDVGNPSVASDLAIDGAVSTVLTEHMSTDKTIGSHENSVSAVNADDSCLSTRPAIEVNDLSQGDEESTQAKHNPKLSLLGHGPHGKQVVEHLLKEYGEDGIRLFCQRWRQAFVEAVKPHFLPAGWDIKHSGRRDFGEFSVYNPVRKASSATATS 1017
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0532 1017 PANTHER POLYMYOSITIS/SCLERODERMA AUTOANTIGEN-RELATED 111 1006 IPR045092 GO:0000175|GO:0000467
Dere07g0532 1017 SMART 35exoneu6 194 362 IPR002562 GO:0003676|GO:0006139|GO:0008408
Dere07g0532 1017 Gene3D HRDC domain 419 518 IPR044876 -
Dere07g0532 1017 SUPERFAMILY Ribonuclease H-like 128 394 IPR012337 -
Dere07g0532 1017 Gene3D - 110 399 IPR036397 GO:0003676
Dere07g0532 1017 Pfam 3'-5' exonuclease 194 361 IPR002562 GO:0003676|GO:0006139|GO:0008408
Dere07g0532 1017 SUPERFAMILY HRDC-like 428 486 IPR010997 GO:0000166|GO:0044237
Dere07g0532 1017 ProSiteProfiles HRDC domain profile. 425 505 IPR002121 GO:0003676
Dere07g0532 1017 FunFam Polynucleotidyl transferase ribonuclease H fold protein with HRDC domain 127 399 - -
Dere07g0532 1017 Pfam HRDC domain 430 471 IPR002121 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g0532 Dere-ChrDere07 8324365 8332315 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere07g0532 07 8324365 8332315 Dere07g0532 07 8324365 8332315 ECH