Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0520 ATGACTAAGCTTTGCCGGAAAATCTCTCAGTTCACCCTTCGCATTCGGATTAACCACCGCGTTTCCATTCTCCGGCGATGCATTCTCCGCGTTCTCCACCGCTTCATGCTCTGTTCCGGAAGGAAGCCCTCTAAGTACCTCATGCTGCCACATTCAGCCGTGCCTTCTCCGTCGCCGCCGCCTCCCTCCGCCGGTGATGCTATTTGTGACGAATTGGTGCAGGACACGGCGCCTCCGTTTCACACCCCTGATTTGGACTCCGATTTGGTTGCTCTCAAGATCAGCCTCTTGGGTGATTGCCAAATAGGAAAGACCAGTTTCCTGGTGAAATATGTAGGAGACGAAATTGGACAGAAAGGCAACGAGAAGAAGGGATTAAATCAGATGGACAAAACTTTAGTTGTTGAAGGGGCACGTATATCGTATAGTATCTGGGAAGTAGAAGGTGATGAAAAATCACATGATCAGATTCCAATGGCTTGTAAGGACTCCGTGGCAATCATGTTCATGTTTGATTTAACAAGCCGATGTACATTAAACAGTGTAATTGGGTGGTATAAAGAAGCCAGGAAATGGAATCTGACGGCAATTCCAGTGATGATAGGAACCAAGTTTGATGATTTCATTCAACTTCCTATAGATTTACAATGGACCATCGCTAGTGAGGCAAGAAAATATGCAAAGGCCATGAATGCAACGCTATTCTTTTCCAGTGCTACCTACAACATCAACGTGAACAAAATCTTCAAGTTCATCACAGCCAAACTCTTCGACCTGCCATGGACAGTGGAGCGAAATCTAACTGTTGGAGAGCCCATCATAGATTTCTAA 831 0.4585 MTKLCRKISQFTLRIRINHRVSILRRCILRVLHRFMLCSGRKPSKYLMLPHSAVPSPSPPPPSAGDAICDELVQDTAPPFHTPDLDSDLVALKISLLGDCQIGKTSFLVKYVGDEIGQKGNEKKGLNQMDKTLVVEGARISYSIWEVEGDEKSHDQIPMACKDSVAIMFMFDLTSRCTLNSVIGWYKEARKWNLTAIPVMIGTKFDDFIQLPIDLQWTIASEARKYAKAMNATLFFSSATYNINVNKIFKFITAKLFDLPWTVERNLTVGEPIIDF 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0520 276 ProSiteProfiles small GTPase Rab1 family profile. 86 276 - -
Dere07g0520 276 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 92 267 IPR027417 -
Dere07g0520 276 PRINTS Transforming protein P21 ras signature 133 155 - -
Dere07g0520 276 PRINTS Transforming protein P21 ras signature 92 113 - -
Dere07g0520 276 PRINTS Transforming protein P21 ras signature 234 256 - -
Dere07g0520 276 PIRSF GTPase_Tem1 2 276 IPR017231 -
Dere07g0520 276 SMART rab_sub_5 92 259 - -
Dere07g0520 276 CDD Spg1 92 273 IPR017231 -
Dere07g0520 276 PANTHER - 89 264 - -
Dere07g0520 276 FunFam Septum-promoting GTP-binding protein 1 82 266 - -
Dere07g0520 276 Pfam Ras family 93 256 IPR001806 GO:0003924|GO:0005525
Dere07g0520 276 Gene3D - 86 266 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g0520 Dere-ChrDere07 8235844 8238098 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere07g0520 07 8235844 8238098 Dere07g0520 07 8235844 8238098 ECH