Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0511 ATGGCTGCATCTTTCTCTGCACCCTCATTGATGATGGAGGAAGAAGCAAGGTTCGAAGCGGAGGTGGCGGAGGTGGAAGCATGGTGGAAGTCGGAGAGGTTCAGGCTAACCCAGCGGCCATACTCGGCGAGAGACGTCGTGGCGCTGCGAGGCAACCTGAGGCAAAGCTATGGGTCCAACGAGATGGCCAAGAAGCTATGGCGAACCCTGAAGAACCATCAAGCCAATGGCACGGCCTCAAGGACCTTCGGTGCACTGGACCCGGTTCAGGTCACCCAAATGGCTAACCACTTGGACACCATCTACGTCTCCGGCTGGCAGTGCTCCTCCACTGCCGCCACCACTAACGAGCCCGGCCCTGACCTCGCCGATTACCCTTACGACACCGTCCCCAATAAGGTTGAACACCTATTCCTGGCCCAGCAATTCCATGATCGAAAACAGAGAGAAGAAAGACTGAGAATGAGCCGAGAAGAGAGAGCCAGAACCCCTTACATTGATTACTTACGACCCATCATAGCCGATGGCGACACTGGGTTTGGTGGCACTACAGCAACTGTTAAGCTCTGCAAGCTTTTCGTTGAACGCGGTGCTGCTGGTGTCCACATCGAAGACCAATCCTCTGTCACCAAAAAATGTGGTCACATGGCGGGAAAAGTTCTCGTTGCCATCAGTGAACACATCAATAGGCTCGTCGCTGCGAGGCTGCAATTCGATGTGATGGGAGTAGAGACATTACTGGTGGCTCGAACTGATGCAGAAGCAGCTAATCTGATTCAGTCCAATATAGACACAAGGGACCATCAGTTTATACTGGGCGTCACCAACCCCAGCCTTAGAGGAAAAAGCTTAGCCACTCTTATGGCGAGTAATATGGCTGCTGGGAAAAACGGAGTTGAGCTTCAGGCTATTGAAGATCAGTGGCTATCAATGGCGAAGTTGAAGACTTTCTCTGAAGCAGTTGCGGATGCGATTAAGAACATGAACATAGGGGAAGAAGACAAGAAAAGGAGGTTGAATGAATTGATGCATTATTCAAGTTATGAGAAGTGTCTCTCGAATGAGGAAGCAAGAGAGATTGCTGAGAGATTGGGTGTGAGAAATCTCTTCTGGGATTGGGACTTGCCTAGAACAAGAGAAGGGTTTTACAGATTCAAAGGGTCTGTTTTAGCAGCAATTGTTCGTGGATGGGCTTTTGCTCCACATGCTGATCTGATATGGATGGAAACTTCAGGCCCCGATTTGGTTGAGTGTACTCAATTTGCTCAAGGGGTTAAGTCTAAACACCCAGAGATAATGTTGGCGTATAATCTTTCTCCATCGTTTAATTGGGATGCTTCAGGCATGACTGATGAGCAAATGGCTGAGTTTATACCAAGAATTGCAAGGTTGGGGTATGTGTGGCAGTTCATAACAGTGGGTGGTTTACACTCTACTGCATTAATTACTTCCACATTTGCGAGGGATTTTGCAAAGAGGGGAATGCTGGCTTACGTGGAGAAGATTCAGAGAGAGGAAAGGAATAATGGGATTGACACACTTGCTCATCAGAAATGGGCTGGTGCTAATTACTATGATAAGTACCTCAAGACTGTGCAGGGAGGAGTGACTGAAGAGCAATTCAAGGAAACAGGGACGAGGCCAGGAACTGTGGACATGGGTGGGGCGAGTATGTTGGTTGCTAAGGCCAGAATGTAG 1698 0.49 MAASFSAPSLMMEEEARFEAEVAEVEAWWKSERFRLTQRPYSARDVVALRGNLRQSYGSNEMAKKLWRTLKNHQANGTASRTFGALDPVQVTQMANHLDTIYVSGWQCSSTAATTNEPGPDLADYPYDTVPNKVEHLFLAQQFHDRKQREERLRMSREERARTPYIDYLRPIIADGDTGFGGTTATVKLCKLFVERGAAGVHIEDQSSVTKKCGHMAGKVLVAISEHINRLVAARLQFDVMGVETLLVARTDAEAANLIQSNIDTRDHQFILGVTNPSLRGKSLATLMASNMAAGKNGVELQAIEDQWLSMAKLKTFSEAVADAIKNMNIGEEDKKRRLNELMHYSSYEKCLSNEEAREIAERLGVRNLFWDWDLPRTREGFYRFKGSVLAAIVRGWAFAPHADLIWMETSGPDLVECTQFAQGVKSKHPEIMLAYNLSPSFNWDASGMTDEQMAEFIPRIARLGYVWQFITVGGLHSTALITSTFARDFAKRGMLAYVEKIQREERNNGIDTLAHQKWAGANYYDKYLKTVQGGVTEEQFKETGTRPGTVDMGGASMLVAKARM 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0511 565 NCBIfam isocitrate lyase 22 538 IPR006254 GO:0004451|GO:0019752
Dere07g0511 565 CDD ICL_PEPM 75 257 IPR039556 GO:0003824
Dere07g0511 565 FunFam Isocitrate lyase 262 377 - -
Dere07g0511 565 Gene3D - 17 535 IPR040442 -
Dere07g0511 565 Gene3D - 262 377 - -
Dere07g0511 565 PANTHER ISOCITRATE LYASE/MALATE SYNTHASE 11 538 IPR006254 GO:0004451|GO:0019752
Dere07g0511 565 Pfam Isocitrate lyase family 21 538 IPR006254 GO:0004451|GO:0019752
Dere07g0511 565 PIRSF ICL 368 547 IPR006254 GO:0004451|GO:0019752
Dere07g0511 565 PIRSF ICL 12 325 IPR006254 GO:0004451|GO:0019752
Dere07g0511 565 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 10 535 IPR015813 GO:0003824
Dere07g0511 565 ProSitePatterns Isocitrate lyase signature. 211 216 IPR018523 GO:0003824
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere07g0511 07 8170381 8173398 Dere07g0511 07 8170381 8173398 ECH