Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0354 ATGCTTTTCTCAGAGAGATCTAAGTACCCACATCAGAGCCAACGGGGTATCTGGGAATCTCTCCAATCTCCTAAATTTCGCTGGTTTTCGCCGTCCGGTATATACAGAAGAATGGTGGCCGGAAATGGTCTGTTTTACCCTATTCTTGGTTTTGCTTCCTGTGTGGTTTTCATGTACATGTCTTTTGGAGACTTGAGGCTGAGTTCTGAGGAAGAACCAAACTTGGCTTTTGTGGAGAGAAATGGGACTCAGTTTATGTTAGATGGCAAAGCGTTCTACATCAATGGGTGGAACTCTTACTGGTTAATGGTTCAGTCTGTGGATGATTATTCCAGACCCAGGGTTCGTGCGATGCTTCAAGCCGGTAAGAAGATGGGTCTCACTGTTTGTAGAACTTGGGCATTTAATGATGGTGACTACAATGCCCTTCAGATTTCCCCTGGTCGGTTCAATGAGCAAGTTTTTAAGGCCTTGGATTATGTCATAGCAGAAGCAAGGCAACATGGAATTCGGCTGCTCCTTGCCCTAGTTAATAACTTGCATGCCTATGGAGGGAAGACACAGTATGTCAAATGGGCATGGGAAGAAGGGATAGGGTTAAGCTCTTCCAATGATTCTTTCTTCTATGATCCATCAATCCGTAGTTATTTCAAGAATTACATCAAGACTATTCTGACAAGGAAGAATACTATCACTGGAATTGAATATAGAAATGATCCCACCATATTTGGCTGGGAATTAATTAATGAACCTCGTTGCATGACTGATCCTTCAGGTGACACTCTCCAAGACTGGATAGAAGAAATGTCAACGTTTGTCAAATTGATTGACAAGAACCATTTGGTGACTATTGGCCTCGAAGGTTTTTATGGTCCTAATGACCCAAAACGCTTGACTGTCAACCCAGAGGAGTGGGCATCCAGACTTGGATCTGATTTTATTCGCAACTCCAGAATTGCAGATATTGATTTCACCTCTGTTCATATCTATCCTGACCATTGGCTTCGTACTTCAGACTTCGAAGAAAACCTGAAATTTGTCTCCAAGTGGATGCTTTCTCACATTGAAGACGGTGACAAAGCATTGAAGAAGCCTGTCTTGTTCTCTGAATATGGGTGGTCAGACTTGACCAAGAACTTTTCACTATCTGACCGTGAAAAGATGTATAAAACAATTCTAGACATAATCCACAAATCTGCTAAGAAAAACAGGTCTGGAGCAGGTGCTTTAGTTTGGCAATTCTTAGTTGAAGGAATGAACGAGTTTCAGGACGATTTCTGGATGGTCCCATGGGAAAGGTCATCAACTTATTCACTATTTGTTCAACAATCATGCAGATTGGCCAAAGTCACAGGATGGACTCAACAGGACAGAAGTTTTGAAGAAATGTGTAAGCATAAATGA 1404 0.4195 MLFSERSKYPHQSQRGIWESLQSPKFRWFSPSGIYRRMVAGNGLFYPILGFASCVVFMYMSFGDLRLSSEEEPNLAFVERNGTQFMLDGKAFYINGWNSYWLMVQSVDDYSRPRVRAMLQAGKKMGLTVCRTWAFNDGDYNALQISPGRFNEQVFKALDYVIAEARQHGIRLLLALVNNLHAYGGKTQYVKWAWEEGIGLSSSNDSFFYDPSIRSYFKNYIKTILTRKNTITGIEYRNDPTIFGWELINEPRCMTDPSGDTLQDWIEEMSTFVKLIDKNHLVTIGLEGFYGPNDPKRLTVNPEEWASRLGSDFIRNSRIADIDFTSVHIYPDHWLRTSDFEENLKFVSKWMLSHIEDGDKALKKPVLFSEYGWSDLTKNFSLSDREKMYKTILDIIHKSAKKNRSGAGALVWQFLVEGMNEFQDDFWMVPWERSSTYSLFVQQSCRLAKVTGWTQQDRSFEEMCKHK 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0354 467 PANTHER - 48 461 IPR045053 GO:0004553
Dere07g0354 467 SUPERFAMILY (Trans)glycosidases 77 443 IPR017853 -
Dere07g0354 467 FunFam Mannan endo-1,4-beta-mannosidase 6 74 451 - -
Dere07g0354 467 Pfam Cellulase (glycosyl hydrolase family 5) 110 413 IPR001547 GO:0004553|GO:0071704
Dere07g0354 467 Gene3D Glycosidases 74 451 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g0354 Dere-ChrDere07 6531217 6535860 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g0354 40 467 Glycoside Hydrolase AT2G20680 69.626 0.0 650
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere07g0354 07 6531217 6535860 Dere07g0354 07 6531217 6535860 ECH