Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0173 ATGGAGTCGATATTGGCGAGAGCGTTGGAGTACACTCTCAAGTACTGGCTCAAATCCTTCTCTAGAGATCAGTTCAAGTTGCAGGGTCGGACGGTGCAGCTCTCCAATCTAGATATAAACGGGGATGCATTGCATTCAAGTGTTGGATTGCCACCTGCTCTGAATGTCGCGACAGCAAAAGTCGGGAAATTGGAGATCATGCTTCCTTCGGTAAGCAACGTACAAATCGAGCCAATCGTTGTGCAAATTGACCGACTTGATTTGGTTCTTGAGGAGAATACCAGTTTCGATGCATCTGCAAGTCCAAAGTGTACCACGCCATCTACTGCCTCCGCAAAGGGTAGCGGTTATGGTTTTGCTGATAAGATTGCAGATGGAATGACTATACAGATTCATACTGTTAATTTATTACTTGAAACTCGTGGAAGTGCTTGTTGCCAAGGGGGAGCAACTTGGGCACCGCCTATGGCATCTATCACCATATGCAACCTTTTGCTGTATACCACAAATGAAGAGTGGCAGGTTGTAAATCTTAAGGAGGCACGAGAGTTCTCCAGTAACAAGAAGTACATATATGTGTTCAAAAAACTTGAATGGGAATCTTTGTCTATTGATCTTTTGCCACATCCTGATATGTTCACGGGTTCTACTTTAGGCCGCTCTCACGAGGGAGTGAACCAGAGAGATGATGATGGTGCCAAGCGAGTTTTTTTTGGAGGAGAGCGATTCCTAGAAGGAATATCTGGAGAGGCATATATCACGATTCAGAGAACTGAATTAAACAGTCCACTTGGGCTTGAAGTTCAATTACACATTACTGAAGCTGTATGCCCTGCATTAAGTGAACCAGGACTGCGTGCCCTTCTCCGCTTTATGACAGGGGTATATGTCTGCCTAAACAGGGGAGATGTTGATTTTAAGGCTCATCAGCGGTCCACAGAAGCAGCTGGGCGCTCTGTTGTCTCTATTGTTGTGGACCATATATTTTTTTGCATTAAAGATACTGAATTCAAGCTTGAGTTTCTATTGCAGTCACTCTTCTTTTCTCGGGCCAGCATTTCTGACTGTGATGATTACAACTTGACAAGGATTACAATTGCTGGACTATTCCTGAGGGATACCTTTTCACGACATCCATGTACCTTGGTGCAACCATTAATGCAAGCTGTCACAAGAGATGCTTTCCATGTGCCAGAATTTGCTAGGAGCTTTTGTCCTCCTATATATCCACTAGGAGAACAGAAATGGCAACTGACTGAGGGTACTCCTCTAATATGCCTTCATTCCCTACAGATCAAGCCTTCTCCACTTCCACCATCCTTTGCTTCTCAAACTGTTATTGATTGTCAGCCTCTAATGATTCATCTACAAGAAGAATCCTGCCTGAGGATATTTTCTTTCTTAGCTGATGGTATTGTTGTCAATCCTGGCGATGTTGTACCAGATTTCTCAGTGAATTCTTTCATTTTCACTCTCAAGGGACTAGATCTTACAATTCCTTTGGACAAGGCCAGAATAAATATTCCTGAAAGCAACATGGACAATGCAGTCCAGAGCTGCTTTTCTGGAGCACGGCTTCATATTGAAAGCCTTTGCTTTTCAGATTCACCTTCTTTGAAACTGAAAATGCTGAACCTGGAGAAGGATCCTGCTTGTTTCTGTCTTTGGGAAGGTCAACCAATTGATGCTAGCATGAAGAAGTGGACTGCTGGAGCATCACATCTTTCTTTGTCTCTAGAAACAGGTACTGGCACATCTGGGTGTCAGAATTCTCTTGGACGGAATGCAGGATTATGGAGATGTGTTGAACTGAAAGATGCTTGCACTGAAGTGGCTATGGCAATGGCTGATGGCAGTCCATTATTAGAAGTTCCTCCTCCAGGGGGTGTTGTGAGGATTGGAGTTGCATGTGAACAATTTTTATCTAACACTTCTGTTGAACAATTATTTTTTGTCCTTGATCTCTATGCTTATTTTGGAAGAGTTAGTCAGAAAATAGCAAAAGCTGGAAGAAGTAAACGATTGAAGAATGTTAGGGATAAATCTTCTAGTAGAAAGTTTATGGACATGGCTCCTAGTGACACTGCTGTAAGTTTAGCGGTGAAAGACCTCCAACTTCAATTTCTGGAATCCTCTTTAATGAATGTTGAGGGAATGCCTCTAGTGCAATTTATTGGAGATGATCTGTTCATTAGTGCCACTCATAGAACCCTTGGTGGTGCTATTGTTGTTTCATCCGCTTTACGTTGGGAGAGTGTTGAGATAGATTGTGTGGATGCCGAGGGGAACTTGGCGCGTGAGAATTGCTCATTTTCAAATTCTGTTGAAAGTATACCATCAATGAGTGGTAATGGATATCCTCAACTAAGAGCTGTATTTTGGGTTCATAACAAAAAGAACAATCTATCAAATCAAAATGCTCATTTGCTTCCCTTTTTGGATATAAGCATGGAGCATGTCATTCCATTATACGAAGCAGACATAGAGCCTCATAGTTTGAATGTCTCGGCATCTATTTCTGGGGTTCGCCTTGGTGGAGGAATGAACTATGCAGAAGCCCTCCTGCATCGCTTTGGAATACTTGCACCTGATGGTGGTCCTGGAAAGGAACTTTGTAAAGGACTAGAAAACTTACAAGCAGGACCATTGTCAAAACTTTTTAAGACAGCACCTTTGATTGCTGGTAATTCAGAAGATGAAGAAAGTGTGACTGAAGGGAAAGAATCAAACTTTTTACACTTGAAGAAGCCAGACAATGTGGATGTTGCTGTAGAATTGAGAGACTGGTTATTTGCTCTTGAAGGTGCTCAAGAGATGGCTGAAAGGTGGTGGTTCTCCAGTCATGAAGATATGGGCAGAGTAGAGAGGTGTTGGCACACGACTTTCCACAGTTTACGAGTGCATGCAAAAAGCAGCCCAAAGGATGTTTCTAATGGAAAAACACAATTGCATGTAAAACGACAATTTCCTGTACAACTGGTTACGGTTGGTGTTCAAGGGTTGGAGATCTTTAAGCCTCATACACAGAAGGACATTCCCTCATCAAAGTTTATAGCAAACAGGGTTAAAGAATCTACTGACACAGTTGGCGGTGCTGGTCTTGAAGCTCGCTTGGTACTATGTGAGGATACTGTTGATGATGAAATGGCTAACTGGAAAGTGGAAAACCTAAAATTCACTGTTAAAGAACCGATTGAGGTGGTTGTAACCAAGGATGAGTTTCAGCACCTGGCTTTTCTCTGCAAATCTGAAATTGACTCAATGGGCCGGATAACAGCTGGGATCCTACGGCTCCTTAAGTTGGAAGGTTCTGTTGGCCAGTCTGCAATGGATCAATTAAGCAACTTAGGAAGTGAAGGCATTGACAAGATTTTCTCTCCTAAAAAGCTCCAGAGAGATTGTACTGTTTTACCATCTCCCTCGTCAAACCCCATAAATGAAAGCCCACACAGAACTAAGAAACCAACATTAACTTTGCTTGAGGAAGCAGTCGTGGATTCACAGGCCAAACTTGATGCTTTAATTACTGAAGTTAGTGCTTCAGAGACTTCAAGTCAGCACCTTGCTATTGTAAATGAAGTTCGTCAAAAGGTTGAGACTATGCAGAATCTATTGATGCAATTGCGGAATGAACTCTAG 3639 0.4248 MESILARALEYTLKYWLKSFSRDQFKLQGRTVQLSNLDINGDALHSSVGLPPALNVATAKVGKLEIMLPSVSNVQIEPIVVQIDRLDLVLEENTSFDASASPKCTTPSTASAKGSGYGFADKIADGMTIQIHTVNLLLETRGSACCQGGATWAPPMASITICNLLLYTTNEEWQVVNLKEAREFSSNKKYIYVFKKLEWESLSIDLLPHPDMFTGSTLGRSHEGVNQRDDDGAKRVFFGGERFLEGISGEAYITIQRTELNSPLGLEVQLHITEAVCPALSEPGLRALLRFMTGVYVCLNRGDVDFKAHQRSTEAAGRSVVSIVVDHIFFCIKDTEFKLEFLLQSLFFSRASISDCDDYNLTRITIAGLFLRDTFSRHPCTLVQPLMQAVTRDAFHVPEFARSFCPPIYPLGEQKWQLTEGTPLICLHSLQIKPSPLPPSFASQTVIDCQPLMIHLQEESCLRIFSFLADGIVVNPGDVVPDFSVNSFIFTLKGLDLTIPLDKARINIPESNMDNAVQSCFSGARLHIESLCFSDSPSLKLKMLNLEKDPACFCLWEGQPIDASMKKWTAGASHLSLSLETGTGTSGCQNSLGRNAGLWRCVELKDACTEVAMAMADGSPLLEVPPPGGVVRIGVACEQFLSNTSVEQLFFVLDLYAYFGRVSQKIAKAGRSKRLKNVRDKSSSRKFMDMAPSDTAVSLAVKDLQLQFLESSLMNVEGMPLVQFIGDDLFISATHRTLGGAIVVSSALRWESVEIDCVDAEGNLARENCSFSNSVESIPSMSGNGYPQLRAVFWVHNKKNNLSNQNAHLLPFLDISMEHVIPLYEADIEPHSLNVSASISGVRLGGGMNYAEALLHRFGILAPDGGPGKELCKGLENLQAGPLSKLFKTAPLIAGNSEDEESVTEGKESNFLHLKKPDNVDVAVELRDWLFALEGAQEMAERWWFSSHEDMGRVERCWHTTFHSLRVHAKSSPKDVSNGKTQLHVKRQFPVQLVTVGVQGLEIFKPHTQKDIPSSKFIANRVKESTDTVGGAGLEARLVLCEDTVDDEMANWKVENLKFTVKEPIEVVVTKDEFQHLAFLCKSEIDSMGRITAGILRLLKLEGSVGQSAMDQLSNLGSEGIDKIFSPKKLQRDCTVLPSPSSNPINESPHRTKKPTLTLLEEAVVDSQAKLDALITEVSASETSSQHLAIVNEVRQKVETMQNLLMQLRNEL 1212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0173 1212 Pfam N-terminal region of Chorein or VPS13 1 98 IPR026854 -
Dere07g0173 1212 Coils Coil 1191 1211 - -
Dere07g0173 1212 PANTHER UNCHARACTERIZED 1 1210 IPR026728 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g0173 Dere-ChrDere07 3739293 3748542 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere07g0173 07 3739293 3748542 Dere07g0173 07 3739293 3748542 ECH