Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g1765 ATGGTAAATGAACCTCTATATCCAATAGCTGTTTTGATTGATGAATTAAAGAACGACGATATTCAGCTGAGACTGAACTCGATCCGCAAACTATCCACAATTGCACGTGCACTTGGGGAAGAAAGGACCAGGAAGGAATTGATTCCATTTCTCAGTGAGAACAATGATGATGATGATGAGGTGCTTCTTGCAGTGGCAGAGGAATTGGGTGTGTTTATTCCATACGTTGGAGGAGTAGAGCATGCCGATGTGCTGCTCCCCCCTTTAGAAACTCTCTGCACCGTTGAGGAAACTTGTGTAAGGGACAAAGCTGTGGAGTCCCTATGTAAAATTGGAGCTCAAATGAGAGAAAAAGAATTGGTTGAACATTTTGTTCCCTTAGTTAAGAGACTGGCTGCTGGTGAATGGTTTACAGCTCGAGTTTCATCATGCGGCTTGTTCCATATTGCTTACCCTCATGCACCTGAGACTATAAAGACTGAACTGAGAACTTTATATGGTCAGCTGTGTCAAGATGATATGCCGATGGTTAGAAGATCCGCTGCAACAAACCTGGGAAAATTTGCTGCTACAATTGAAGCTGATTACCTGAAAACCAACATAATGCCCATATTTGAGGATCTTGCACAGGATGATCAAGATTCTGTTCGGCTGCTTGCTGTTGAGGGTTGTGCAGCCCTTGGTAAATTGTTGGAGCCTCAAGATTGTGTGGCGGAGATTCTTCCTGTTATAGTCAAATTCTCTCAGGACAAGTCATGGCGAGTACGCTACATGGTTGCAGATCAACTATATGAGCTATGTGAAGCTGTTGGTCCTGAGTCCACCAGGTCAGACTTGGTTCCTGCATATGTTTGGCTACTGCGTGATAATGAAGCTGAAGTACGAATTGCTGCTGCTGGAAAAGTGACCAAGTTTTGCCAAATGTTAAATCCAGAACTTGATATTCAGCATATTCTACCATGTTTAAAGGACTTATCTACTGATTCATCTCAGCACGTCCGCTCTGCATTGGCTTCAGTTGTAATGGGAATGGCACCACTTTTAGGGAAAGAGGCAACAATTGAGCAGCTTCTCCCTATTTTTCTTTCTCTTTTGAAAGATGAGTTTCCTGATGTCAGGCTGAACATCATCAGCAAGCTTGACCAAGTGAACCAGGTAATTGGTATTGATCTGTTATCCCAGTCTTTATTGCCAGCTATTGTTGAGCTTGCTGAGGATCGACACTGGAGGGTTCGACTTGCAATCATAGAATATATACCCTTATTGGCAAGTCAGTTGGGTGTAGAGTTTTTTGATGATAAACTTGGAGCCCTTTGCCTGCAATGGCTTAAGGACAAGGTATACTCTATTCGTGATGCGGCTGCTAATAATGTGAAACGCTTAGCAGAAGATTTTGGACCAGAATGGGCAATGCAGCACATTGTTCCTCAGGTTCTGGACATTATTAATGATCCACACTATCTGAATCGGATGACCATTCTGCAAGCAATTTCACAGCTGGCTCCTGTTCTGGGCTCTGAGATTACTTGTTCAAAATTGCTCCCTCTGGTCATCAATGCATCAAAAGATAGGGTTCCCAATATCAAGTTCAATGTTGCTAAGGTGTTGCAGTCCGTTGTTCCAGTTGTTGATCAGTCCGTTGTTGAGCAGACTATCCGTCCGTGTTTGGTTGAGCTGAGCGAGGATCCAGATGTTGATGTTAGGTTCTTTGCCTCCCAAGCGCTTCAATCTAGCAATCAAGTCATGATGTCCAATTAG 1758 0.4346 MVNEPLYPIAVLIDELKNDDIQLRLNSIRKLSTIARALGEERTRKELIPFLSENNDDDDEVLLAVAEELGVFIPYVGGVEHADVLLPPLETLCTVEETCVRDKAVESLCKIGAQMREKELVEHFVPLVKRLAAGEWFTARVSSCGLFHIAYPHAPETIKTELRTLYGQLCQDDMPMVRRSAATNLGKFAATIEADYLKTNIMPIFEDLAQDDQDSVRLLAVEGCAALGKLLEPQDCVAEILPVIVKFSQDKSWRVRYMVADQLYELCEAVGPESTRSDLVPAYVWLLRDNEAEVRIAAAGKVTKFCQMLNPELDIQHILPCLKDLSTDSSQHVRSALASVVMGMAPLLGKEATIEQLLPIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEYIPLLASQLGVEFFDDKLGALCLQWLKDKVYSIRDAAANNVKRLAEDFGPEWAMQHIVPQVLDIINDPHYLNRMTILQAISQLAPVLGSEITCSKLLPLVINASKDRVPNIKFNVAKVLQSVVPVVDQSVVEQTIRPCLVELSEDPDVDVRFFASQALQSSNQVMMSN 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g1765 585 ProSiteProfiles HEAT repeat profile. 552 585 IPR021133 -
Dere06g1765 585 ProSiteProfiles HEAT repeat profile. 318 356 IPR021133 -
Dere06g1765 585 ProSiteProfiles HEAT repeat profile. 162 200 IPR021133 -
Dere06g1765 585 ProSiteProfiles HEAT repeat profile. 201 239 IPR021133 -
Dere06g1765 585 ProSiteProfiles HEAT repeat profile. 474 512 IPR021133 -
Dere06g1765 585 FunFam Serine/threonine-protein phosphatase 2A regulatory subunit A alpha isoform 1 579 - -
Dere06g1765 585 ProSiteProfiles HEAT repeat profile. 85 123 IPR021133 -
Dere06g1765 585 Pfam HEAT repeat 240 268 IPR000357 GO:0005515
Dere06g1765 585 Gene3D - 2 577 IPR011989 -
Dere06g1765 585 ProSiteProfiles HEAT repeat profile. 513 551 IPR021133 -
Dere06g1765 585 Pfam HEAT repeats 359 457 - -
Dere06g1765 585 ProSiteProfiles HEAT repeat profile. 357 395 IPR021133 -
Dere06g1765 585 ProSiteProfiles HEAT repeat profile. 396 434 IPR021133 -
Dere06g1765 585 ProSiteProfiles HEAT repeat profile. 8 46 IPR021133 -
Dere06g1765 585 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A 65 KDA REGULATORY SUBUNIT 4 582 - -
Dere06g1765 585 ProSiteProfiles HEAT repeat profile. 279 317 IPR021133 -
Dere06g1765 585 ProSiteProfiles HEAT repeat profile. 240 278 IPR021133 -
Dere06g1765 585 SUPERFAMILY ARM repeat 6 577 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g1765 Dere-ChrDere06 32553920 32562723 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere06g1765 06 32553920 32562723 Dere06g1765 06 32553920 32562723 ECH