Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g1482 ATGGCCGCCACTTCCACGCTCTCTTCCTCTCTACCTTCAATTTCTCTTCACGCTTCTCCTTCTTCCGCCTCTTCAAAGCCCAACCACCTCCTACTACCTTCTACTCTCGCTCTAAGCTCTCTGTTCGGAACCAGAATCACGATTCAAACCTCGACTTCATGCCGTTTCCTGCCCAACAGCAAGTATTGCCGTGCGACATCGGCGACCGTGTCGTTTAGTCTTCCAACCACGAAACCCCAGACGGCTACCCCAGAGAAACTCCCGAAATGGTCGGCAAGGGCGATAAAATCATTTGCAATGGCGGAATTGGAAGCAAGGAAGCTCAAGTATCCCAATACAGGAACCGAGGCCCTTCTGATGGGAATTTTAGTAGAAGGAACTAGTAAAGCTGCAAAATTTTTAAGGGCTAATGGAATTACTCTTTTCAAAGTACGAGAAGAAACGGTAGAGCTTCTTGGGAAATCTGACATGTATTTCTTTAGTCCAGAGCATCCTCCATTGACTGAACCAGCTCAGAAATCCATTGATTGGGCTGTTGACGAGAAATTAAAGTCAGGCGAAGGTGGGGAAATAACCGTGACTCATTTGCTTCTAGGAATTTGGTCACAAGAAGAATCAGCAGGTCACATGATCTTGGCTACTCTAGGCTTCAATGATGAAAAAGCCAAAGAAGTTGCCAAATCATTGAACGGAGATGTTGATATGAGCTTTAAGAAGCAAGCTTAA 726 0.4573 MAATSTLSSSLPSISLHASPSSASSKPNHLLLPSTLALSSLFGTRITIQTSTSCRFLPNSKYCRATSATVSFSLPTTKPQTATPEKLPKWSARAIKSFAMAELEARKLKYPNTGTEALLMGILVEGTSKAAKFLRANGITLFKVREETVELLGKSDMYFFSPEHPPLTEPAQKSIDWAVDEKLKSGEGGEITVTHLLLGIWSQEESAGHMILATLGFNDEKAKEVAKSLNGDVDMSFKKQA 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g1482 241 MobiDBLite consensus disorder prediction 1 26 - -
Dere06g1482 241 Gene3D - 89 238 IPR036628 -
Dere06g1482 241 PANTHER ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPT1, CHLOROPLASTIC 1 237 IPR044217 -
Dere06g1482 241 SUPERFAMILY Double Clp-N motif 89 232 IPR036628 -
Dere06g1482 241 ProSiteProfiles Clp repeat (R) domain profile. 87 232 IPR004176 -
Dere06g1482 241 Pfam Clp amino terminal domain, pathogenicity island component 190 226 IPR004176 -
Dere06g1482 241 Pfam Clp amino terminal domain, pathogenicity island component 101 153 IPR004176 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g1482 Dere-ChrDere06 27833460 27836851 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere06g1482 06 27833460 27836851 Dere06g1482 06 27833460 27836851 ECH