Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g1471 ATGAGACTCGTAGTGCCTCTCCAAGGTGTAGTCCAAGGCAGAGGAGGCCTTCTTCTGGGTTCTTTAATCCCCTGTGCTCTCTTCTACTTCCTCCAACTCCATCTCAGACGGCGTCGTTCCGATGGCTCTTCTCGGCTTCCTCTGTCTCCGTCGTCATCGATGCTCCCGGAGCTCCCACAGTCCCCGTCCCGGTCCATCCGTCCGGTTCAAGTGTCCTCTCTCGCGAATTTTCTTGCGGATCCTGATGATTCGCCGTATTACATTGGGTTGAAGAGAGAGGCTCATGATGCTTATGATAGATTGAACAATCCAAATGGGATAATTCAGCTGGGCTCGTCCGAGAACAAGCTTTGCTTGGATTTAATTGAGAATTGGTTATCAGACAGCTTGGACAAATGGCTAATGGGGACTGATGATTATACTTTTAGTGTTAACGGGATTGCAACGTACCAGCCATTTGACGGATTGGAGGAATTGAAAGTGGCCATGTCAAATTTTATGTCTCATGTGTTGGGAGGAATGGTGAAATTCGACCCATCTAATATGGTGTTAACTTGTGGGGCAACTCCTGCTATTGAGATGCTGTCTTTCTGCTTGGCTAACCATGGAGATGCTTTTCTTGTCCCTACGCCTTACTATCCGGGCTTTGACAGTGATGTGAGATGGCGAACTGGTGTAGACCTGATTCCAGTTCACTGTCAAAGCACAGACAATTTCACTCTAAGTATGGCTGCTCTCGAAGAAGCATATTGTCGAGCTAGAAAAAGGCGAGTCCAAGTTCGGGGAATTCTCATTTCCAACCCTGCAAATCCTGTTGGCAATCTGCTGACACAGGACATGCTTAAAAGTCTCCTGCAATTTGCCCATGAGAAAAACATCCATATCATTGCTGATGAAATACTTGCAGGATCCGTATATGGAAGGGAAAAGTTTGTGAGCATAGCTCAAATTCTTGATTCAGAAGATCTAGACATGAGCCGGGTTCATATAATATATGGCCTGTCAAAAGACCTCTCTCTGGCAGGCTATAGAGTTGGGGTTATATATTCCTTTAACCAGATTGTTCTGGCTGCTGCAAGGAAGTTAAGTAGGTTTTGCTCTATATCTGCTCCTTCACAGAGGTTAGTTGTTTCAATGCTCTCAAATGGAAGATTTGTTCAGGAGTACATTGAAACCAACAGGAAGAGAATGCGGGAAGTGCATGATGAACTTGAGTCTGGTTTAAGTCATCTGGGAATCAAGTGTGCTAAGAGCAGTGCAGGATTGTATTGTTGGGCTGACATGAGAGGATTATTCCAACCTCATAGTAAGAAAGGGGAACTTGAGTTATGGGAGAGGTTTATGAGTGTTGCTAAGATCAATATAACTCCTGGATCAACCTGCCATTGCATAGAACCAGGATGGTTTAGAATTTGTTTTACTACAGTAACTTTGGAGGACATTCCTCTGATTATTGAACGGATCAGGAAAGTTGTTGAAACTTGTAAATCTTCCAGTTGA 1500 0.4447 MRLVVPLQGVVQGRGGLLLGSLIPCALFYFLQLHLRRRRSDGSSRLPLSPSSSMLPELPQSPSRSIRPVQVSSLANFLADPDDSPYYIGLKREAHDAYDRLNNPNGIIQLGSSENKLCLDLIENWLSDSLDKWLMGTDDYTFSVNGIATYQPFDGLEELKVAMSNFMSHVLGGMVKFDPSNMVLTCGATPAIEMLSFCLANHGDAFLVPTPYYPGFDSDVRWRTGVDLIPVHCQSTDNFTLSMAALEEAYCRARKRRVQVRGILISNPANPVGNLLTQDMLKSLLQFAHEKNIHIIADEILAGSVYGREKFVSIAQILDSEDLDMSRVHIIYGLSKDLSLAGYRVGVIYSFNQIVLAAARKLSRFCSISAPSQRLVVSMLSNGRFVQEYIETNRKRMREVHDELESGLSHLGIKCAKSSAGLYCWADMRGLFQPHSKKGELELWERFMSVAKINITPGSTCHCIEPGWFRICFTTVTLEDIPLIIERIRKVVETCKSSS 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g1471 499 MobiDBLite consensus disorder prediction 42 65 - -
Dere06g1471 499 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 79 493 - -
Dere06g1471 499 CDD AAT_like 150 490 - -
Dere06g1471 499 ProSitePatterns Aminotransferases class-I pyridoxal-phosphate attachment site. 333 346 IPR004838 GO:0003824|GO:0009058|GO:0030170
Dere06g1471 499 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 359 382 - -
Dere06g1471 499 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 110 136 - -
Dere06g1471 499 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 293 316 - -
Dere06g1471 499 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 181 201 - -
Dere06g1471 499 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 257 281 - -
Dere06g1471 499 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 203 224 - -
Dere06g1471 499 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 144 160 - -
Dere06g1471 499 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 327 351 - -
Dere06g1471 499 SUPERFAMILY PLP-dependent transferases 84 493 IPR015424 -
Dere06g1471 499 Gene3D Aspartate Aminotransferase, domain 1 96 486 IPR015422 GO:0003824
Dere06g1471 499 MobiDBLite consensus disorder prediction 44 65 - -
Dere06g1471 499 Gene3D - 130 382 IPR015421 GO:0003824
Dere06g1471 499 Pfam Aminotransferase class I and II 143 488 IPR004839 GO:0009058|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g1471 Dere-ChrDere06 27649512 27652730 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere06g1471 06 27649512 27652730 Dere06g1471 06 27649512 27652730 ECH