Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g1340 ATGATGGCGTCCGTCATCAGTGTGTTCTTGCTTTCGGTATTTGCCTGTTCTCTCGGTAGCTATTTTGTGGAAAGCCGAAAGGAATTAAGGAATAAGGAGTTGACCCAGAAAACTGCGTTACAATTGGACCATCCAATTTATCTCAACAGAATTGACCCATCACATGTTCTCCAACTCTCTTGGCGACCAAGGGTCTTTCTATACGATGGTTTTCTGTCAGACAAGGAGTGTGACTACCTTATTTATTTGGCACAAACTGTGGAAGAAAAATCATCAGGGCAGGATCATCATTCAGAGGGAGATGTGGCAGACAGGAAGCTTGCCTCAGGAACTTTATTGAACATAGAAGATGATATCGTTGCAAGGATTGAAGAAAGAATTTCACTTTGGACTTTCCTTCCTAAAGAGAACAGCAAGCCTATCGAGGTCATGCATTATGCACTCGAGGAGGCTGGACAGAACTCAGATTTCTTTAACAAATCCAAAATGGAAATGAGTGGACCTTTAATGGCAACTGTTGTTTTATATCTGTCAAATGTCACTCAAGGGGGTCAAATTCTCTTCCCTGAGTCGGAGCCCAGGAGGGAAAGCTGGCAAGACTGTGGAAAAAGTGATAATATTTTGAAACCAGTCAAAGGAAATGCAATTGTGTTTTTCTCTCTTCACCCCAGCGCATCTCCTGACAATAGTAGCTTGCACGATAGATGCCCTGTCCTTAAGGGTGAAATGTGGTCTGCTACTAAATTCTTTTATGCAAGACCAGTTAGTGTGGAAAAGGTCTCATCCACATCAGATGTTGGTGACGAATGCACTGATGAAGATGATAATTGCGCCTCATGGGCAGCCATGGGAGAATGTCAACGAAATCCTGTATACATGATTGGCTCTCCTGATTACTATGGAACATGCAGGAAGAGTTGTAATGCATGTTGA 933 0.4277 MMASVISVFLLSVFACSLGSYFVESRKELRNKELTQKTALQLDHPIYLNRIDPSHVLQLSWRPRVFLYDGFLSDKECDYLIYLAQTVEEKSSGQDHHSEGDVADRKLASGTLLNIEDDIVARIEERISLWTFLPKENSKPIEVMHYALEEAGQNSDFFNKSKMEMSGPLMATVVLYLSNVTQGGQILFPESEPRRESWQDCGKSDNILKPVKGNAIVFFSLHPSASPDNSSLHDRCPVLKGEMWSATKFFYARPVSVEKVSSTSDVGDECTDEDDNCASWAAMGECQRNPVYMIGSPDYYGTCRKSCNAC 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g1340 310 Pfam 2OG-Fe(II) oxygenase superfamily 155 251 IPR044862 -
Dere06g1340 310 FunFam Probable prolyl 4-hydroxylase 12 55 251 - -
Dere06g1340 310 SMART ShkT_1 269 310 IPR003582 -
Dere06g1340 310 PANTHER PROLYL 4-HYDROXYLASE ALPHA SUBUNIT 43 249 IPR045054 -
Dere06g1340 310 Gene3D q2cbj1_9rhob like domain 55 251 - -
Dere06g1340 310 ProSiteProfiles ShKT domain profile. 270 310 IPR003582 -
Dere06g1340 310 SMART p4hc 63 251 IPR006620 GO:0005506|GO:0016705|GO:0031418
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g1340 Dere-ChrDere06 25758443 25762132 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere06g1340 06 25758443 25762132 Dere06g1340 06 25758443 25762132 ECH