Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g0185 ATGCTGACGTGGGCGGCCAGGATTGCATCACATGTATGGATTAGCTTCAGTAAAGCTGGATGGGTTTTTGGGTCAGAGTCCTTGCAAAATTCTGCATTTCGGTCTGAGATCGGTATTCTGGTTCCACTGCACTTAAAAAAGAATCGGTTTTGCGGTCCTCGTTTTCAGAGAGCACCTTTAAGCTTTTGTCGTCGTTTGAATTATATTATGGCCAGTGATTCTGCTGCAGTGTCCAATGGCAATGTCAACTCGCATCCCAATCCCCAGAGGAATTACCAAGTGGTTGTGGCTGCAACCCAGGATATGGGTATTGGTAAGGATGGAAAACTACCCTGGAGAATCCCTTCTGATCTCAAATTTTTTAAGGAGATCACTTTAACTACATCTGATCCTGGGAAGAAGAATGCGGTTATAATGGGTAGAAAAACATGGGAGAGTATCATTCTGGAGAATCGTCCTCTTCCTGGTCGCCTTAATGTTGTTCTAACTCGCTCAGGAAGCTTCGATATTGCAACTGCAGAAAATGTTGTTATATGCGGAAGCATGTCTTCTGCTTTGGAATTGTTAGCTGCTTCGCCTTACTGTCTATCAATTGAGAAAGTATTTGTTATAGGAGGTGGCCAGATATTTAGAGAGGCTCTTAATGCACCTGCATGCGAAGCGATCCACATTACTGAAATTGAGACAAGCATTGAATGTGATACTTTCATGCCTCCAATTGATTCTTTTGTATTTCAGCCGTGGTACTCTTCCTTTCCTAAGGTTGAGAACAACATCCGCTATTGTTTTACTACATATGTGCGGGTAAGGAGTTCTGTAGTGGAGTCCTTGACTCAGAATTCTGATCCAATTTCTGATAGTGGATCAGATTCAACAAAATTTGAGGTCAAGAACTTCTCTTTTCTTCCTAAAATGATTTTTGAGAGACATGAGGAGTATATGTATCTCAAACTAGTTCAAGATATCATCTCTGAAGGTAATGCTAAGGATGATAGGACTGGGACTGGTACCTTCTCAAAATTTGGTTGCCAGATGAGGTTCAACTTGCGTAGAAACTTTCCTCTTCTAACAACCAAGAAAGTATTTTGGCGAGGGGTTGTTGAAGAGCTTCTTTGGTTTATTAGTGGTTCAACAAATGCCAAGGTTCTGCAGGCAAAAGGCATCCATATATGGGATGGCAATGCATCCAGAGAATACCTTGATAGCATTGGATTGGCAGAGAGGGAGGAGGGTGACTTAGGACCTGTTTACGGGTTTCAGTGGAGGCACTTTGGTGCCAAGTATACTGACATGCATGCTGACTACTCTGGCAAAGGATTTGATCAGCTTCTAGATGTTATTAACAAGATAAAGCAAAATCCTGTTGATCGGCGGATTATTCTCTCAGCTTGGAATCCAGTTGATCTTAAATTGATGGCACTACCTCCCTGCCACATATTTGCCCAGTTCTATGTAGCAAATGGGGAGTTATCTTGTCAAATGTATCAGCGATCTGCAGACATGGGCTTGGGTGTGCCATTTAACATTGCATCTTATGCTCTCCTGACATGCATGATTGCTCGTGTTTGTGAACTTGAGCCAGGTGATTTTATCCATGTTATTGGGGATGCACATGTTTACCGCAATCATGTGAGACCCTTGCAGGAGCAGCTCCGGAACCATCCTAAACCTTTTCCAACTTTGGAGATAAATCCGAAGAAGGATATAGATTCTTTTGTGGCTGCTGATTTCAAACTCAAAGGATATGATCCTCACCAGAAGATAGAAATGAAGATGGCTGTGCTTTTTGAACTGAGGCACAATCATAGGAGGTTTTTGTGTACGAATAAAGAAAACTGCTAG 1842 0.4224 MLTWAARIASHVWISFSKAGWVFGSESLQNSAFRSEIGILVPLHLKKNRFCGPRFQRAPLSFCRRLNYIMASDSAAVSNGNVNSHPNPQRNYQVVVAATQDMGIGKDGKLPWRIPSDLKFFKEITLTTSDPGKKNAVIMGRKTWESIILENRPLPGRLNVVLTRSGSFDIATAENVVICGSMSSALELLAASPYCLSIEKVFVIGGGQIFREALNAPACEAIHITEIETSIECDTFMPPIDSFVFQPWYSSFPKVENNIRYCFTTYVRVRSSVVESLTQNSDPISDSGSDSTKFEVKNFSFLPKMIFERHEEYMYLKLVQDIISEGNAKDDRTGTGTFSKFGCQMRFNLRRNFPLLTTKKVFWRGVVEELLWFISGSTNAKVLQAKGIHIWDGNASREYLDSIGLAEREEGDLGPVYGFQWRHFGAKYTDMHADYSGKGFDQLLDVINKIKQNPVDRRIILSAWNPVDLKLMALPPCHIFAQFYVANGELSCQMYQRSADMGLGVPFNIASYALLTCMIARVCELEPGDFIHVIGDAHVYRNHVRPLQEQLRNHPKPFPTLEINPKKDIDSFVAADFKLKGYDPHQKIEMKMAVLFELRHNHRRFLCTNKENC 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g0185 613 NCBIfam thymidylate synthase 314 594 IPR000398 GO:0004799|GO:0006231
Dere06g0185 613 PRINTS Thymidylate synthase family signature 528 545 IPR000398 GO:0004799|GO:0006231
Dere06g0185 613 PRINTS Thymidylate synthase family signature 446 465 IPR000398 GO:0004799|GO:0006231
Dere06g0185 613 PRINTS Thymidylate synthase family signature 472 487 IPR000398 GO:0004799|GO:0006231
Dere06g0185 613 PRINTS Thymidylate synthase family signature 490 516 IPR000398 GO:0004799|GO:0006231
Dere06g0185 613 PRINTS Thymidylate synthase family signature 353 374 IPR000398 GO:0004799|GO:0006231
Dere06g0185 613 SUPERFAMILY Dihydrofolate reductase-like 88 268 IPR024072 -
Dere06g0185 613 Gene3D Dihydrofolate Reductase, subunit A 73 270 IPR024072 -
Dere06g0185 613 ProSiteProfiles Dihydrofolate reductase (DHFR) domain profile. 91 268 IPR001796 GO:0004146|GO:0046654
Dere06g0185 613 Gene3D Thymidylate synthase/dCMP hydroxymethylase domain 301 594 IPR036926 -
Dere06g0185 613 ProSitePatterns Thymidylate synthase active site. 457 485 IPR020940 GO:0004799|GO:0006231
Dere06g0185 613 FunFam Bifunctional dihydrofolate reductase-thymidylate synthase 74 269 - -
Dere06g0185 613 Hamap Thymidylate synthase [thyA]. 312 594 IPR000398 GO:0004799|GO:0006231
Dere06g0185 613 PIRSF DHFR-TS 73 594 IPR012262 GO:0004146|GO:0004799|GO:0006730
Dere06g0185 613 FunFam Possible thymidylate synthase 306 594 - -
Dere06g0185 613 CDD TS_Pyrimidine_HMase 315 548 IPR023451 -
Dere06g0185 613 Pfam Dihydrofolate reductase 93 268 IPR001796 GO:0004146|GO:0046654
Dere06g0185 613 Pfam Thymidylate synthase 314 594 IPR023451 -
Dere06g0185 613 ProSitePatterns Dihydrofolate reductase (DHFR) domain signature. 103 125 IPR017925 GO:0004146
Dere06g0185 613 PANTHER THYMIDYLATE SYNTHASE 1 115 594 IPR045097 GO:0016741
Dere06g0185 613 SUPERFAMILY Thymidylate synthase/dCMP hydroxymethylase 293 594 IPR036926 -
Dere06g0185 613 CDD DHFR 95 267 IPR001796 GO:0004146|GO:0046654
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g0185 Dere-ChrDere06 2497092 2504039 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere06g0185 06 2497092 2504039 Dere06g0185 06 2497092 2504039 ECH