Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g0137 ATGCCGCCGGCGGCCGGAAAGTGCAGCAAAATCCGACACATTGTGCGAATCCGCCAGATGCTTCTCCGGTGGCGCAAGAAGGCCCGTATAACGGCGGTGCGAGCGCCGTCCGATGTGCCCGCAGGCCACGTGGCCGTCTGTGTGGGCCCCAGCTGCAGGAGGTTCATCGTGCGCGCGACGTACCTGAACCACCCGGTCTTCAGTAAGCTTCTGATTCAAGCCGAGGAGGAGTACGGGTTCTGCAACCAAGGTCCCTTGACGATCCCGTGCGACGAGTCCATGTTCGAAGAGGTTCTCCGAGTCGTGTCCCGGTCCGAACCGGGCCGCTCGGCCCGGTTCTTGAGCCTCGATGATGTCCGGAGGCGCTGCCACGTGGACGTCCGAAGTAGCTATGACTTCGTAGGAGAATCCTGGCCCTTGCTTCATGACGAGCCCATCTGCTAA 444 0.6194 MPPAAGKCSKIRHIVRIRQMLLRWRKKARITAVRAPSDVPAGHVAVCVGPSCRRFIVRATYLNHPVFSKLLIQAEEEYGFCNQGPLTIPCDESMFEEVLRVVSRSEPGRSARFLSLDDVRRRCHVDVRSSYDFVGESWPLLHDEPIC 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g0137 147 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 25 99 IPR003676 GO:0009733
Dere06g0137 147 Pfam Auxin responsive protein 16 101 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g0137 Dere-ChrDere06 1840202 1840645 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g0137 6 141 Calmodulin-binding Proteins AT4G34750 51.049 6.99e-42 134
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere06g0137 06 1840202 1840645 Dere06g0137 06 1840202 1840645 ECH