Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g0135 ATGGAGATAGAGGACGAAGCTTCAATGGAGATGGCAAAACAAGGTTATGTCGAGATGACTAAATTCAGCTTCGATTTCTCAGGCGAACTTGTAATTGATATGACCAACAGCTCATCTTCGAAAAAGTACGGTCAAGATCAGCCTGAAATAAGTGGTCCCACTCCTAAATCACTGCGAACCAAAATGGGCAAATCCGAAGATAATGAGAAAAAGAGCATGGGTAAGAAACTCAAAGATGTCGAAATAAGCGTTCCAATAGTGTATGGTAACACCGCATTCTGGCTTGGCAAGAAGGCAAGCGAGTATCAGTCACATAAATGGACTGTGTATGTTCGTGGAGCAACCAATGAGGACCTTGGGGTGATCATAAAGCGTGCTGTTTTTCAGTTGCATTCTAGTTTCAACAATCCAACAAGGGTTGTGGAGTCACCTCCTTTTGAGGTGTCAGAGTCAGGATGGGGTGAATTTGAAATTGCCATCACACTTTATTTCCACACTGATGTTTGTGACAAGCCTTTGAACTTATATCATCACTTGAAGTTGTATCCAGAGGATGAGAACAGTTCCATGTCTACAAAAAAACCTGTTGTTGTGGAATCATATGACGAGATAGTTTTCCCTGATCCTTCTGAGGCTTTTTTAGCTCGTATTCAAAACCATCCAGTGGTAAACTTGCCAAGATTGCCTGCTGGAATAACCTTACCTCCACCAATGCCTGTTGAGGATGCAAGTAAAAGGAGGAGAGGTGACACTAAAGATCATCCCCTAACCCAATGGTTCACGAATTTCTCAGAAGCAGATGAGCTCTTACAGCTTGCAGCAGCTCGTCAGCAGGTTCAAGCTCATATCGCTAAACTCAAAAGACAGATAAGTTTGCTAGATGGGCAGCATCAGCAGTTCAAATCTTCTTCTGACCAGTAG 921 0.4278 MEIEDEASMEMAKQGYVEMTKFSFDFSGELVIDMTNSSSSKKYGQDQPEISGPTPKSLRTKMGKSEDNEKKSMGKKLKDVEISVPIVYGNTAFWLGKKASEYQSHKWTVYVRGATNEDLGVIIKRAVFQLHSSFNNPTRVVESPPFEVSESGWGEFEIAITLYFHTDVCDKPLNLYHHLKLYPEDENSSMSTKKPVVVESYDEIVFPDPSEAFLARIQNHPVVNLPRLPAGITLPPPMPVEDASKRRRGDTKDHPLTQWFTNFSEADELLQLAAARQQVQAHIAKLKRQISLLDGQHQQFKSSSDQ 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g0135 306 ProSiteProfiles YEATS domain profile. 76 220 IPR005033 GO:0006355
Dere06g0135 306 MobiDBLite consensus disorder prediction 37 74 - -
Dere06g0135 306 MobiDBLite consensus disorder prediction 234 255 - -
Dere06g0135 306 Gene3D YEATS domain 77 229 IPR038704 -
Dere06g0135 306 CDD YEATS_TFIID14_like 82 213 - -
Dere06g0135 306 PANTHER PROTEIN AF-9 HOMOLOG 73 304 IPR005033 GO:0006355
Dere06g0135 306 FunFam Transcription initiation factor TFIID subunit 14 77 230 - -
Dere06g0135 306 Coils Coil 269 289 - -
Dere06g0135 306 Pfam YEATS family 104 183 IPR005033 GO:0006355
Dere06g0135 306 MobiDBLite consensus disorder prediction 60 74 - -
Dere06g0135 306 MobiDBLite consensus disorder prediction 37 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g0135 Dere-ChrDere06 1814391 1818374 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere06g0135 06 1814391 1818374 Dere06g0135 06 1814391 1818374 ECH