Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g2650 ATGGCGAAATCGAGCGCAGACGATGCTGAGCTCCGGCGAGCTTGCCAGGCTGCACTTGAAGGCACCAAACATAAGGTGGTTATGTCGATCCGTGTTGCTAAGAGTCGCGGGATTTGGGGAAAACCCGGCATGTTGGGGGCCCGTCAACCAATGGCCAAGCCTAGGGTTCTCGCTCTTTGCTGAGGTGAGAAGGGCCCTCACTCCGTCCCTCATAGTGTACTACTATTGGCTCTACTAGGCAGCATCTACCTACACAAGCTTGAACAGGAGATGGGAAGGATCCGGCAAAACCTGCTATTTTATGCAGTGAAAGCAAAAGGTCAGAGGACAAAAGCTTTTCTTCGAGTCTTCAAGTATTCCAATGGAGGAGTTCTTGAGCCTGCAAAGCTTTACAAGCTGAAACACCTCTCAAAAATGGAAGTTATAACAAATGATCCCAGTGGATGTACGTTTACGCTGGGGTTTGATAACATCAGAAATCATGCTGTAGCTCCTCCTCCTCAGTGGACAATGCGGAATGTCGATGACAGGAACCGTATCCTAATGCAAATCTTAAATATATGTAAAGATGTACTTGGTCGCCTTCCTAAGGTTGTCGGTATAGATGTTGTGGAGATGGCTCTCTGGGCTAAGGAGAATAAACCCTCAGTTGCTGCTCAAAGGGATCCACAAGATGGTGGTCCTGTTGAATCTGCTGTGACTGAGACAGAACTGAAAGTCAATGTAGAAAAGGAACTTGTTTCCCAGGCAGAGGAAGAGGACATGGAGGCTCTTTTGGGAACTTATGTTATGGGTATTGGTGAAGCAGAGGCATTTTCTGAAAGGTTAAAGAGAGAGCTCCAAGCTCTGGAAGCAGCAAATGTGCATGCCATCCTAGAAAGTGAACCTTTGATAGATGAGGTGTTGCAGGGACTTGAAGCTGCAGCACATTGTGTAGAAGACATGGATGAATGGTTAGGCATTTTTAACGTTAAACTCCGGCACATGAGGGAGGATATTGAATCAATAGAAACCCGCAATAACAAGTTGGAGATGCAATCAGTAAATAACCAAGCTCTTATTGAGAAGCTTGATAAACTTGTTGAGCGGTTGCATGTTCCTCCTGAGTATGCGGCGTGTCTGACAGGAGGTTCATTTGACGAGGCGCATATGCATCAAAATGTGGAAGCATGTGAGTGGTTGACAGGTGCCTTGCGTAGTCTTCGAGTGCCTAATATAGATCCTGCTTATGCAAATATGAGAGCTGTTAAAGAGAAGCATGGTGAACTTGAAATATTAAAATCTACTTTTGTCAGGAGAGCTTATGAGTTCTTAACAAATTATTTTGCCAGTCTGGTGGATTTCATGATTAGTGATAAAAATTACTTTTCTCAGAGGGGACAGTTGAAGAGGCCTGATCATGCTGACTTACGGTACAAGTGCAGGACATATGCACGTCTTCTGCAACATTTAAAGATTGTTGATAAGAATGGCTTGGGTCCATTGAGGAAAGCTTATTGCTGTTCTCTTAATGTGCTTCTTCGAAGGGAGGCTCGTGAATTTGCAAATGAACTTCGTGCTAGTACAAAGGCGCCTAAAAATCCAACTTCTTGGCTAGAAAGTTCCACAGGTTCTGGTCAGAATGCAAATGCCGCTGACACATCTTCAGTTTCTGAGGCTTATGCAAAGATGCTCACAATTTTTATCCCACTTCTGGTGGATGAGAGCTCTTTTTTCGCTCAATTCATGTGCTTTGAAGTTTCCACTCTGGTTCCTCCAGGGGGCACTGATAATGGTAATGAAACTGGATATGATGATGATGATGGTGCTGAAGCCAATGATGATGATTTGGGGATTATGGACGTTGATGAGAATGATAACAACTCTGGTATAAATTCTGCAGAGCTTGCATCTTTAAATGAGTTCCTTCAAGATTTGCTTGACGGAATCCAAGAAGACTTCTATGCTATTGTGGATTGGGCATACAAGATTGATCCCTTGCGCTGCATATCAATGCATGGAATAACAGAGCGCTATCTCTCTGGACAGAAAGCTGATGCAGCTGGATTTGTACGCCTTCTGCTTGGTGACCTGGAGTCTCGGATATCCATGCAGTTCATCCGTTTTGTAGATGAAGCTTGCCATCAGATTGAAAGATATGAGCGCAACGTACGCCAAATGGGTGTTGTGGCTTACATTCCCAGATTTGCAACCCTTGCAACACGGATGGAGCAGTACATCCAGGGACAATCTAGGGATTTGGTTGACCAAGCATATATGAAATTTGTTAGCATAATGTTTGTGACTTTAGAAAAAATTGCACAAACTGATCCAAAGTATGAAGATATTTTTCTTTTAGAGAACTATGCTGCATTTCAAAATAGTTTGTATGACCTTGCCAATGTTGTTCCAACTTTAGCGAAGTTTTACCATCAGGCCAGTGAAGCCTATGAACAAGCTTGCGCACGCCATATTAGCATGGTTATATACTATCAATTTGAACGCCTTTTCCAGTTTGCTAAGAGGATTGAGGACTTGATGTTCACTATCGCACCTGAAGAGATTCCTTACCAGCTCGGGTTGTCAAAAGCGGATCTTAGGAAGACGTTAAAATCCAGTTTGTCTGGGGTTGATAAGTCCTTTGCTGCAATGTATAAGAAATTACAGAAGAACTTGACTTCAGAGGAACTCTTACCTTCTTTATGGGATAAATGCAAGAAGGAGTTTCTTGATAAGTATGAAAGCTTCGTCCAGCTTGTCGCCAAGACCTACCCTGCGGAGTCAGTGCCATCAGTAGCAGAGATCAGAGACATTTTAGTTACCATATGA 2808 0.4348 MAKSSADDAELRRACQAALEGTKHKVVMSIRVAKSRGIWGKPGMLGARQPMAKPRVLALCXGEKGPHSVPHSVLLLALLGSIYLHKLEQEMGRIRQNLLFYAVKAKGQRTKAFLRVFKYSNGGVLEPAKLYKLKHLSKMEVITNDPSGCTFTLGFDNIRNHAVAPPPQWTMRNVDDRNRILMQILNICKDVLGRLPKVVGIDVVEMALWAKENKPSVAAQRDPQDGGPVESAVTETELKVNVEKELVSQAEEEDMEALLGTYVMGIGEAEAFSERLKRELQALEAANVHAILESEPLIDEVLQGLEAAAHCVEDMDEWLGIFNVKLRHMREDIESIETRNNKLEMQSVNNQALIEKLDKLVERLHVPPEYAACLTGGSFDEAHMHQNVEACEWLTGALRSLRVPNIDPAYANMRAVKEKHGELEILKSTFVRRAYEFLTNYFASLVDFMISDKNYFSQRGQLKRPDHADLRYKCRTYARLLQHLKIVDKNGLGPLRKAYCCSLNVLLRREAREFANELRASTKAPKNPTSWLESSTGSGQNANAADTSSVSEAYAKMLTIFIPLLVDESSFFAQFMCFEVSTLVPPGGTDNGNETGYDDDDGAEANDDDLGIMDVDENDNNSGINSAELASLNEFLQDLLDGIQEDFYAIVDWAYKIDPLRCISMHGITERYLSGQKADAAGFVRLLLGDLESRISMQFIRFVDEACHQIERYERNVRQMGVVAYIPRFATLATRMEQYIQGQSRDLVDQAYMKFVSIMFVTLEKIAQTDPKYEDIFLLENYAAFQNSLYDLANVVPTLAKFYHQASEAYEQACARHISMVIYYQFERLFQFAKRIEDLMFTIAPEEIPYQLGLSKADLRKTLKSSLSGVDKSFAAMYKKLQKNLTSEELLPSLWDKCKKEFLDKYESFVQLVAKTYPAESVPSVAEIRDILVTI 935
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g2650 935 Coils Coil 326 363 - -
Dere05g2650 935 MobiDBLite consensus disorder prediction 594 615 - -
Dere05g2650 935 Pfam Exocyst complex component SEC3 N-terminal PIP2 binding PH 97 189 IPR028258 -
Dere05g2650 935 Pfam Exocyst complex component Sec3 546 918 IPR019160 GO:0000145|GO:0006887
Dere05g2650 935 Pfam Exocyst complex component Sec3 269 537 IPR019160 GO:0000145|GO:0006887
Dere05g2650 935 PANTHER SEC3/SYNTAXIN-RELATED 102 931 - -
Dere05g2650 935 MobiDBLite consensus disorder prediction 525 544 - -
Dere05g2650 935 MobiDBLite consensus disorder prediction 588 617 - -
Dere05g2650 935 SMART Sec3_PIP2_bind_2 92 191 IPR028258 -
Dere05g2650 935 Coils Coil 266 293 - -
Dere05g2650 935 Coils Coil 233 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g2650 Dere-ChrDere05 37330546 37350768 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g2650 1 935 EF-hand Containing Proteins AT1G47550 78.846 0.0 1494
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g2650 05 37330546 37350768 Dere05g2650 05 37330546 37350768 ECH