Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g2623 ATGGCGCTGACGGACTTCTTCGCGGGCGAAATCGCCACGGAACTTCTGAAAATGCTGATAAACATATCACGCAAGTCACTGCTATGCAAAGCAAGTGCGGATCAGCTTATATCCTACATCGATCAACTCCTCCCCACCATCGAAGAAATCAAATACTCAGGCGTTGAGCTTCCCCCCGCCCGCCAATCCCAGCTTGATCGCCTCTCCGAGATTCTCCGCTCCGGAAAGGAGCTATCCCAAAAGGTTCTCTCCTCCAGCCGCTGGAACGTCTACAAGAACTTGCAGCTGGCCAAGAAGATGGAGAAGCTGGAGAAGAACGTGTCCAGGTTCGTCCAAGGTCCCATGCAGGCTCATATCTTGGCGGACGTGCACCACAACCGGTTCGAGATGGCAGAGCGGTTCGACAGGGTGGAGGCGTCGAACCGGCGGCTGGAGCAGTACTTCGGAGCCATGAAGATTGGAGTCGGGGGAGGAGGGTGGATGGAGGAGGCGGTGAGGAGTATGGAAGAGGATGAGAGGGTGGACGTTAATTCAGGGAACTTCGGAGTTGGTTTGGATTTGGGGAAGAAGAAGGTTAAGGAATTGATTGTTGAAAGGCAGGATTTGTGGGTTGTCGGGATTTGTGGCATTGGTGGTTCAGGCAAGACCACTCTGGCCAGAGAGCTCTGCAGAGACGAATCTGTTAGAACTTATTTCAACGAGAGAATCTTGTTCCTGACAGTTTCACAGTCCCCAAATGTGGAGCAGCTGAGAGGCAAGATTTGGGGTTTTATCATGGGCAATGAAAATTTGAATCCTAATTATGTGATTCCCCAGTGGAAGCCGCAATTCGAATGCAGAAGTGAAGCACGAATCCTGATTGTTCTGGATGATGTGTGGTCACTCTCTGTTCTAGAAAAGCTTGTCTGTAGAATGCCTGGTTGTAAATTCGTGGTAGTCTCAAGATTCAAGTTCCCGACAGTTTTCTCTGTCAGCTACGAAGTTGAACTATTGAGCGAAGAGGATGCCCTGTCTTTGTTCTGTCACCATGCCTTTGGACAGAAGTCAATTCCTGTTTCTGCAAATAAGAATTTGGTGAAGCAGGTCGTGACTGAGTGTGGAAGACTTCCATTAGCACTTAAAGTGATTGGAGCTTCCTTACGAGATCAGTCTGAGATGTTTTGGGCGGGTGTGAAAAACAGGCTATCCCAAGGCCAAAGCATAGGGGAATCATATGAAATTAATCTGATTGAAAGAATGGCAATCAGTATAAATTACCTACCGGCAAAAATCAAGGAATGCTTCCTGGATCTGTGTTCTTTTCCAGAAGACAAGAAGATTCCTCTGGACGTTCTCATCAACATGTGGGTTGAAATCCATGACATCGATGAAACGGAAGCTTTTGCTATTATCGTTGAGCTCTCGAACAAGAATCTTCTCACCTTGGTGAAAGAGGAACGGGCTGGAGGCATGTACAGCAGTTGCTTCGAGATCTCTGTTATACAACATGATGTACTGAGAGACCTTGCTCTTAATTTGAGCAATCGTGAGAGCATTAATGAGCGCCGGCGGTTAGTTATGCCAAAAAGAGAAAACGGACTCCCTAAAGAATGGTTAAGATATCAATATCGACCGTTTGAGGCTCAGATTGTTTCAATTCACACTGGTGAAATGAAAGAAGTAGATTGGTTTAGAATGGAATTTCCCAAGGCCGAAGTGCTGATCATCAACTTCTCCTCTGGTGAATTCTTCTTGCCTCCCTTCATTGACAGAATGCCAAATTTGAGGGCATTGATATTGATAAACTATAGCGCATCATACGCTTCCATTCAAAATTTTCGCGTTTTTGAGAATCTGGCAGCCTTGAGGAGCCTGTGGCTGGAAAAAATTTCCATCCCTCAGTTGTCAAACTTTGCGTTGATGAACTTACGCAAATTATTTGTAGTCCTCTGCAAGATAAATGACAATCTGGACGGGAAAATGACAGATTTGTCACAGATCTTCCCGAACGTCTCAGAGCTCACACTTGATCTCTGTGATGATTTAACTGAGCTTCCCTCAAGCATTTGCAGAATGGAATCACTCCAGAATCTAAGTCTCACCAACTGCCACAATGTAATTCAATTGCCTGATGAATTGGGTAAATTACGATCTCTGGTGATCCTGCGGTTATATGCTTGTCCTGCTCTGGAGGCACTTCCTCGTAGCATCGGTGAGCTTACTAGACTAAAGTACATAGACATATCTCAATGTGTTAATCTAGGATCCATCCCTGTAGAGATCGGTAAATTAGTAAATTTGGAGAAGATAGACATGAGGGAGTGCTCTTTGATTAGGGTTTTACCAAAGTCTGCAGTGTCATTGAAGTCGCTAAGGCTTGTGATTTGTGATGAGGAGGTGTCTGGGATGTGGAAAGATGTGGAGAAGGCCAAGCCAGATGTCCATATTCAAGTATCAGAACAGTGTTATGGTCTGGACTGGCTTGATGAGAAATAA 2475 0.4562 MALTDFFAGEIATELLKMLINISRKSLLCKASADQLISYIDQLLPTIEEIKYSGVELPPARQSQLDRLSEILRSGKELSQKVLSSSRWNVYKNLQLAKKMEKLEKNVSRFVQGPMQAHILADVHHNRFEMAERFDRVEASNRRLEQYFGAMKIGVGGGGWMEEAVRSMEEDERVDVNSGNFGVGLDLGKKKVKELIVERQDLWVVGICGIGGSGKTTLARELCRDESVRTYFNERILFLTVSQSPNVEQLRGKIWGFIMGNENLNPNYVIPQWKPQFECRSEARILIVLDDVWSLSVLEKLVCRMPGCKFVVVSRFKFPTVFSVSYEVELLSEEDALSLFCHHAFGQKSIPVSANKNLVKQVVTECGRLPLALKVIGASLRDQSEMFWAGVKNRLSQGQSIGESYEINLIERMAISINYLPAKIKECFLDLCSFPEDKKIPLDVLINMWVEIHDIDETEAFAIIVELSNKNLLTLVKEERAGGMYSSCFEISVIQHDVLRDLALNLSNRESINERRRLVMPKRENGLPKEWLRYQYRPFEAQIVSIHTGEMKEVDWFRMEFPKAEVLIINFSSGEFFLPPFIDRMPNLRALILINYSASYASIQNFRVFENLAALRSLWLEKISIPQLSNFALMNLRKLFVVLCKINDNLDGKMTDLSQIFPNVSELTLDLCDDLTELPSSICRMESLQNLSLTNCHNVIQLPDELGKLRSLVILRLYACPALEALPRSIGELTRLKYIDISQCVNLGSIPVEIGKLVNLEKIDMRECSLIRVLPKSAVSLKSLRLVICDEEVSGMWKDVEKAKPDVHIQVSEQCYGLDWLDEK 824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g2623 824 PRINTS Disease resistance protein signature 366 380 - -
Dere05g2623 824 PRINTS Disease resistance protein signature 279 293 - -
Dere05g2623 824 PRINTS Disease resistance protein signature 731 747 - -
Dere05g2623 824 PRINTS Disease resistance protein signature 204 219 - -
Dere05g2623 824 Gene3D Ribonuclease Inhibitor 545 807 IPR032675 -
Dere05g2623 824 SUPERFAMILY L domain-like 496 786 - -
Dere05g2623 824 Gene3D - 411 502 IPR036388 -
Dere05g2623 824 Pfam NB-ARC domain 190 410 IPR002182 GO:0043531
Dere05g2623 824 Gene3D - 330 410 IPR042197 -
Dere05g2623 824 ProSiteProfiles RPW8 domain profile. 1 149 IPR008808 -
Dere05g2623 824 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 3 821 IPR039203 GO:0050832
Dere05g2623 824 Gene3D - 165 320 IPR027417 -
Dere05g2623 824 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 9 132 IPR008808 -
Dere05g2623 824 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 183 431 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g2623 Dere-ChrDere05 37071214 37074354 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g2623 569 822 Receptor kinase-like Gene Family AT1G08590 24.609 1.50e-12 69.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g2623 05 37071214 37074354 Dere05g2623 05 37071214 37074354 ECH