Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g2590 ATGAGAGGATCCTCCCCCAATACCGTAGAGCCGCGGCACCGGTTATCGGCCTCAACTAATGAAGATAATAACAAGAGAAGATGTCAAAGAAGTAAATACTTTAGAGATGTTGAGAAAGCATTACATTCTCCATTCCAAGATAGAAGTATAAATTGCAAGCCTACCTGGAAATTGGTTATGGTTATTATTTTATTGGGAACTTTAGTCACAATTTTCCATCCTCCAGCAATTTATGACACTGATCCTCTGTCAAACTCTATAACGAGGCCAACTTTTGTAGACAAATGGAAAAGAGAGTTTGATACTATTGATCCACGTTATGATTCACTTCTAAATATTGAGTGGGGCCAAATATCAAAAGTTCTTACAAGATTGATAGATAGGAACACATATCAGGGAGTTGGTTTGCTAAACTTTAACGACAGTGAGATTGATCACTGGAAACAGCAACAGCTGATACCAGACGCTGAGCATGTAGTCCTGCACCTCGACTATGCTTCAATTAACATTACATGGGAAGTCCTGTACCCTGAATGGATAGATGAAGAAGAAGAATTTGAGGTTCCTGTTTGTCCTACACTACCAAAGATTCAAGTACCTGGAAAACCAAGACTTGATCTTATTGCTGTCAAGCTCCCCTGCAATAAGTCTGGGAGATGGTCAAGAGATGTGGCTCGTTTGCACCTGCAGCTTGAAGCAGCAAGGCTTGCAGTCTCTTCTAAAGGTTCCCATCCAGTGCGTGTGCTTTTTGTCACTGATTGCTTCCCTATACCAAATCTCTTTACATGCAAGGAACTCATTCAACGGGAGGGGAGTGCATGGCTTTACGAACCAAACCTGCATATGCTGAGAGATAAACTGCATCTGCCGGTGGGATCATGTGAACTATCAGTTCCTCTTGCTGCTAAAGAAAACTTTTACTCGGAAAGGGCTCACCGAGAAGCTTATGCAACCATCCTGCACTCTGCACATGTATATGTTTGTGGAGCCATTGTTGCAGCTCAGAGTATTCGCATGGCTGGTTCAACACGTGATCTTGTTATTTTAGTTGATGAAACAATTAGTGACTATCATAGGGGGGGTCTGGAGGCTGCTGGATGGAAGATTCATACAATCAAAAGAATCAGGAACCCAAAAGCTGAACCGGAGGCATATAATGAGTGGAACTACAGCAAGTTCCGCCTTTGGCAGCTAACAGACTATGACAAAATCATCTTCATTGATGCTGACATGCTTATACTCAGAAATATTGATTTCCTCTTCGAGATGCCTGAAATATCAGCCATAGGGAATAATGCCACCCTTTTTAACTCAGGTGTAATGGTAATTGAACCATCAAATTGTACATTTCAACTTCTAATGGATCACATCAATGAGATTGTCTCCTACAATGGTGGGGACCAAGGATATCTGAATGAAATATTCACGTGGTGGCATCGGATTCCCAAACATATGAACTTTTTGAAGCACTTCTGGGAAGGTGATGAGGAAGAGAAAAAAGCAATGAAAACTCGTCTCTTCGGAGCTGATCCTCCAATTCTTTATGTACTCCATTATCTGGGTACTAAACCCTGGCTTTGCTTCCGAGATTATGACTGCAACTGGAACGTGGACATTCTGCAGGAGTTTGCAAGTGATGTAGCTCACGCAACATGGTGGAAGGTGCATGATGCCATGCCCGAAAACTTACAGAAGTTCTGTTTGCTTAGGTCCAAGCAGAAGGCAGCATTAGAGTGGGATCGTAGACAGGCGGAGAAAGGGAACTACACTGATGGTCACTGGAAAATTAAGATAAAAGACAAGCGTTTAAAAATATGCTTTGAGGAGTTCTGCTTCTGGGAGAGCATGTTATGGCACTGGGGCGAAAAGAATTGGACAGATAATGCTACCGTTAACAATCCGCCACCTGCTATCACTACGAAATCTCTTTCTTCGTTATAA 1941 0.423 MRGSSPNTVEPRHRLSASTNEDNNKRRCQRSKYFRDVEKALHSPFQDRSINCKPTWKLVMVIILLGTLVTIFHPPAIYDTDPLSNSITRPTFVDKWKREFDTIDPRYDSLLNIEWGQISKVLTRLIDRNTYQGVGLLNFNDSEIDHWKQQQLIPDAEHVVLHLDYASINITWEVLYPEWIDEEEEFEVPVCPTLPKIQVPGKPRLDLIAVKLPCNKSGRWSRDVARLHLQLEAARLAVSSKGSHPVRVLFVTDCFPIPNLFTCKELIQREGSAWLYEPNLHMLRDKLHLPVGSCELSVPLAAKENFYSERAHREAYATILHSAHVYVCGAIVAAQSIRMAGSTRDLVILVDETISDYHRGGLEAAGWKIHTIKRIRNPKAEPEAYNEWNYSKFRLWQLTDYDKIIFIDADMLILRNIDFLFEMPEISAIGNNATLFNSGVMVIEPSNCTFQLLMDHINEIVSYNGGDQGYLNEIFTWWHRIPKHMNFLKHFWEGDEEEKKAMKTRLFGADPPILYVLHYLGTKPWLCFRDYDCNWNVDILQEFASDVAHATWWKVHDAMPENLQKFCLLRSKQKAALEWDRRQAEKGNYTDGHWKIKIKDKRLKICFEEFCFWESMLWHWGEKNWTDNATVNNPPPAITTKSLSSL 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g2590 646 MobiDBLite consensus disorder prediction 1 26 - -
Dere05g2590 646 FunFam Hexosyltransferase 311 563 - -
Dere05g2590 646 PANTHER GLYCOGENIN SUBFAMILY MEMBER 222 606 - -
Dere05g2590 646 Pfam Glycosyl transferase family 8 320 526 IPR002495 GO:0016757
Dere05g2590 646 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 311 562 IPR029044 -
Dere05g2590 646 SUPERFAMILY Nucleotide-diphospho-sugar transferases 314 564 IPR029044 -
Dere05g2590 646 CDD GT8_Glycogenin 314 559 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g2590 Dere-ChrDere05 36478902 36483654 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g2590 5 622 Glycosyltransferase AT1G77130 70.305 0.0 889
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g2590 05 36478902 36483654 Dere05g2590 05 36478902 36483654 ECH