Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g2584 ATGCAGAGTTGCCCCTACCTCAGTACCCAATCGCTGTCGCATGCATGGGTCTCAAGTGGCCGATATCGGACAAACCGCCACCTCCTACCACCGACCCAACCCCTCAGGCTGTCATCACCACCGATCACCGCTATGGCCGCACCGGCACCCCCTGCGCCTCTCATAAAACGAAAGACCCACTCATTGCCGCCGGAGAAGATAGAAGTTTTCAAGTCACTGGAAGGCTGGGCTTCGGAGGGGCTGCTGCCGCTGCTGAAGCCGGTGGAGCAGTGTTGGCAGCCACAGAACCTCTTGCCCGACTCTTCGTTGCCGTTCGATGAGTTCATGGATCAAGTGAAGGAATTGCGGGACCGGACGGCTGAGCTTCCAGATGAGTACTTGGTGGTTCTGGTGGGTGATATGATCACGGAGGATGCATTGCCTACGTATCAGACCTGGATAAGCAACCTCGATGCGATCAGGGACGAGACTGGAGCAAGCCCGGATCCGTGGGCCGTGTGGACTCGTTCTTGGAGTGCTGAGGAGAATAGGCACGGCGATTTGCTCAAAACCTATCTCTATTTATCGGGACGGGTTGATATGCTCATGGTGGAGAAGACCATACAGTATTTGATTGGAGCTGGCATGGATCTGGGAACAGAACACAATCCATATTTGGGATTCGTCTACACGTCGTTTCAGGAGCGAGCCACCTTTGTATCACACGGTAACACGGCTCGCTTAGCTAAGGAAGGGGGTGATCCAGTGCTTGCGCGCATATGTGGCACCATCGCAGCAGACGAGAAGCGCCACGAGAATGGCTACGTTAGAATCGTCGAGAAGCTTCTAGAAGTGGATCCCACGGGTGCAATGCTGGCCATCGCAGACATGATGCAGAAGAAAATAACTATGCCAGCTCACCTGATGCACGATGGGAGGGACCCACGTCTATTCGACCATTTCTCTGCCGTGGCGCAGCGGCTTGGTGTGTACACGGCCAACGATTATGCAGATATACTGGAGTTCTTGATCGGACGGTGGAGATTGGAGAAGCTGGAGGACCTGACGAGTGAGGGACGACGCGCGCAGGATTTCGTGTGTGGACTAGCACTAAGAATTAGAAGGTTGCAAGAGCGAGCCGATGAGCGAGCGCGCAAGATGGAGCCGCATGGCATGAAATTCAGCTGGATCTTCAACAAAGAGGTGGCCTTGGCAGTGTGA 1200 0.5475 MQSCPYLSTQSLSHAWVSSGRYRTNRHLLPPTQPLRLSSPPITAMAAPAPPAPLIKRKTHSLPPEKIEVFKSLEGWASEGLLPLLKPVEQCWQPQNLLPDSSLPFDEFMDQVKELRDRTAELPDEYLVVLVGDMITEDALPTYQTWISNLDAIRDETGASPDPWAVWTRSWSAEENRHGDLLKTYLYLSGRVDMLMVEKTIQYLIGAGMDLGTEHNPYLGFVYTSFQERATFVSHGNTARLAKEGGDPVLARICGTIAADEKRHENGYVRIVEKLLEVDPTGAMLAIADMMQKKITMPAHLMHDGRDPRLFDHFSAVAQRLGVYTANDYADILEFLIGRWRLEKLEDLTSEGRRAQDFVCGLALRIRRLQERADERARKMEPHGMKFSWIFNKEVALAV 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g2584 399 Gene3D Ribonucleotide Reductase, subunit A 49 397 IPR012348 GO:0016491
Dere05g2584 399 PANTHER ACYL- ACYL-CARRIER-PROTEIN DESATURASE-RELATED 54 395 IPR005067 GO:0006631|GO:0045300
Dere05g2584 399 CDD Acyl_ACP_Desat 65 373 IPR005067 GO:0006631|GO:0045300
Dere05g2584 399 FunFam Stearoyl-[acyl-carrier-protein] 9-desaturase, chloroplastic 50 397 - -
Dere05g2584 399 SUPERFAMILY Ferritin-like 57 395 IPR009078 -
Dere05g2584 399 ProSitePatterns Fatty acid desaturases family 2 signature. 315 334 IPR005803 GO:0006633|GO:0016491
Dere05g2584 399 Pfam Fatty acid desaturase 65 391 IPR005067 GO:0006631|GO:0045300
Dere05g2584 399 PIRSF Dlt9_acylACP_des 32 397 IPR005067 GO:0006631|GO:0045300
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g2584 Dere-ChrDere05 36392747 36395035 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g2584 22 397 Acyl Lipid Metabolism Gene Families AT1G43800 73.560 0.0 587
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g2584 05 36392747 36395035 Dere05g2584 05 36392747 36395035 ECH