Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g2582 ATGATAACAGCAGATGATTTCTACAACGTGATGTGCGCAATGGTTCCCCTATACTTCGCAATGCTCTTAGCCTACGCTTCCGTAAAATGGTGCAAGATATTCACCCCCGAGCAGTGTTCCGGCATCAACCGCTTCGTTGCCGTCTTCGCCGTTCCCGTCCTCTCCTTCCATTTCATCTCTCACAACAACCCCTACCAGATGGATTCCAAATTTATCATAGCCGACACTATCTCCAAGCTCCTCGTCCTCGTCTTGCTCTCCCTCTGGGCCATCTTCTTCTCCGCCGGCACCCTCGACTGGCTCATCACCCTCTTCTCCCTCGCCACTTTGCCCAACACTCTCGTCATGGGCATCCCTTTGCTCCAAGCCATGTATGGCCCCTTCACCCAGTCCCTCATGGTCCAACTTGTTGTACTTCAATGTATCATATGGTACACTCTACTGCTGTTCTTGTTTGAATACAGAGCTGCGACCCTTTTGATTCACGCCCACTTTCCTGGCCCTGCGGCTGCATCTATAACCCAATTCGAGATCGACGATGACGTCATATCCCTTGACGGGCGCGATGTGCCACTCCGAACCGAATCTGAAAGCGACAACCATGGGCGTATTCGTGTCCGGATCCGACGCTCCACGTCCTCTGCTCCTGACTCCGCATTATCTTCGTCCATAGGCCTCACTCCCAGACCCTCCAACCTGTCCAACACGGATATCTTCTCCGTCAACACGCCACTACAGCTGCACGAGTTTCAAGGTACTATCGCGGAGGCGGCGGCGGCGGGAGTGGGTCATGATATCGTGTTCGGGCACGGCGATCTGGGATTCGGGTACCCATATGCGAGCCCTCGGTTGTCTGGATACGCGTCGTCGGATGCGTACTCGCTCCAGCCGACGCCGCGGCCGTCGAATTTTAATGAACAGGAGACGATAACTACGGCAAGTACGCCGGTGTGGGCGAGGTCCCCGATTTCCGGCGGGAGGATATACCGTCAGTCACCGATGGCGTTTACTGGGCCCAGGGTGGTGTGCGAATTGCCGCCGGGGAAGTGCCAAGGCGGGGAGAGACAAGGATGCAAGGACATTATTGGTTCAGTGTCAGAGAAAGAAATTAGCTTTAGAGACAGCACCAAAATCCCAATGCCGGAGGAAGCAGCTGGTCCAAAAGAAGCACAAAAAATGCCACACGCCCTCGTGATGACAAGGCTTATACTAGTGGTAGTAGGAAGGAAACTATCTCGGAACCCTAACACATATTCTAGTGCGCTAGGGCTTCTTTGGTCTCTCATCTCCTTCAAATGGAATGTGGAAATGCCTATTTTGGTCAAATCCTCCATCAAAATAATATCGGATGCAGGTCTTGGGATGGCTATGTTCAGCTTAGGGCTGTTCATGGCGCTTCAGCCCCGGATCATAGCGTGCGGCACAAAAAGAGCAGCGATGGGAATGGGCATCCGCTTCATCGGAGGGCCTGTAGTAATGTTTGCCGCCTCCATTGCTATGGGATTGAAAGGACCCAAACTCCATACTGCCATTGTCCAGGCAGCTCTTCCTCAAGGGATAGTGCCATTTGTGTTTGCAAGGGAATACGGGCTGCACCCTGATATTTTGAGCACAGGGGTTATCTTTGGCATGTTGGTTTCCTTACCCGTAACGCTGTTATATTACATATTTCTGGGTCTCTGA 1683 0.5264 MITADDFYNVMCAMVPLYFAMLLAYASVKWCKIFTPEQCSGINRFVAVFAVPVLSFHFISHNNPYQMDSKFIIADTISKLLVLVLLSLWAIFFSAGTLDWLITLFSLATLPNTLVMGIPLLQAMYGPFTQSLMVQLVVLQCIIWYTLLLFLFEYRAATLLIHAHFPGPAAASITQFEIDDDVISLDGRDVPLRTESESDNHGRIRVRIRRSTSSAPDSALSSSIGLTPRPSNLSNTDIFSVNTPLQLHEFQGTIAEAAAAGVGHDIVFGHGDLGFGYPYASPRLSGYASSDAYSLQPTPRPSNFNEQETITTASTPVWARSPISGGRIYRQSPMAFTGPRVVCELPPGKCQGGERQGCKDIIGSVSEKEISFRDSTKIPMPEEAAGPKEAQKMPHALVMTRLILVVVGRKLSRNPNTYSSALGLLWSLISFKWNVEMPILVKSSIKIISDAGLGMAMFSLGLFMALQPRIIACGTKRAAMGMGIRFIGGPVVMFAASIAMGLKGPKLHTAIVQAALPQGIVPFVFAREYGLHPDILSTGVIFGMLVSLPVTLLYYIFLGL 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g2582 560 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED 1 559 - -
Dere05g2582 560 Pfam Membrane transport protein 10 555 IPR004776 GO:0016020|GO:0055085
Dere05g2582 560 NCBIfam auxin efflux carrier 1 560 IPR014024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g2582 Dere-ChrDere05 36365471 36369760 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g2582 1 538 Organic Solute Cotransporters AT1G77110 67.199 0.0 716
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g2582 05 36365471 36369760 Dere05g2582 05 36365471 36369760 ECH