Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Dere05g2549 | ATGAAAGTGACATGGAAGAACAGCAAGAAACGCTCGTTGTCGGCGTTGTCCAACTTCAGTAATCTCCCTTTTGAGCGTCAACAGGATGACGATGTTCATCGCCAACACCGAGCTCATACGCACTCCAATCAAGATGCTGAAATCGGTGCTCACAACTCTCTCCAATCCAATGACCTAGACAGCCCCCACCACTCTGACTTATATCAGGCAAGACGTCTAGCCAAAGAGTTTCAAGCTCAGGGAGACAAGCTTGCTGAGGATGGGAATTACCAGGAAGCATTAGGTAAATGGGAGTCTGCTCTTACATTGACTCCTGAAATTGCAGTTCTACATGAACAGAAAGCCCAAGTTCTACTGGAAATTGGAGATGCGTGGAATGCTTTAAAAGCTGCAACGCAATTGGACTCATCATGGGCTGAGGCATGGGTCACGCTTGGCAGGGCACAGCTAAATTTTGGTGAGCCTGATAGTGCTATTGAAAGTTTTGACAGAGCCTTATCAATCAAGCCTGATTGCGAGGAAGTTCAAGAAGATAGAAAAACTGCATTACATCTCGTAAAGAAGAGAAGGCAGCTCCACTCAGCAGGCTTGAGTAACACTAAAAATCGTTATGCAGTTGGTGATAAGGATGAATGCGCCTAA | 642 | 0.4579 | MKVTWKNSKKRSLSALSNFSNLPFERQQDDDVHRQHRAHTHSNQDAEIGAHNSLQSNDLDSPHHSDLYQARRLAKEFQAQGDKLAEDGNYQEALGKWESALTLTPEIAVLHEQKAQVLLEIGDAWNALKAATQLDSSWAEAWVTLGRAQLNFGEPDSAIESFDRALSIKPDCEEVQEDRKTALHLVKKRRQLHSAGLSNTKNRYAVGDKDECA | 213 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Dere05g2549 | 213 | ProSiteProfiles | TPR repeat profile. | 139 | 172 | IPR019734 | GO:0005515 | |
| Dere05g2549 | 213 | MobiDBLite | consensus disorder prediction | 26 | 44 | - | - | |
| Dere05g2549 | 213 | MobiDBLite | consensus disorder prediction | 8 | 25 | - | - | |
| Dere05g2549 | 213 | SUPERFAMILY | TPR-like | 74 | 190 | IPR011990 | GO:0005515 | |
| Dere05g2549 | 213 | ProSiteProfiles | TPR repeat profile. | 74 | 107 | IPR019734 | GO:0005515 | |
| Dere05g2549 | 213 | Pfam | Tetratricopeptide repeat | 139 | 176 | - | - | |
| Dere05g2549 | 213 | ProSiteProfiles | TPR repeat region circular profile. | 139 | 171 | - | - | |
| Dere05g2549 | 213 | Gene3D | Tetratricopeptide repeat domain | 66 | 206 | IPR011990 | GO:0005515 | |
| Dere05g2549 | 213 | MobiDBLite | consensus disorder prediction | 1 | 64 | - | - | |
| Dere05g2549 | 213 | MobiDBLite | consensus disorder prediction | 45 | 63 | - | - | |
| Dere05g2549 | 213 | SMART | tpr_5 | 74 | 107 | IPR019734 | GO:0005515 | |
| Dere05g2549 | 213 | SMART | tpr_5 | 139 | 172 | IPR019734 | GO:0005515 | |
| Dere05g2549 | 213 | PANTHER | OSMOSIS RESPONSIVE FACTOR | 1 | 211 | - | - |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Dere05g2549 | 05 | 36008924 | 36012832 | Dere05g2549 | 05 | 36008924 | 36012832 | ECH |