Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g2503 ATGAGTGCCTACGTTGTTGGTGTCATTGTTCCTCTTTTGGTTACTATACTATTCCGGAATTCCAAGAATGTGAAAAAGCGTGGCCTGCCCGTCGATGTTGGTGGTGAACCTGGGGTTGCAATTCGGAATCATCGGTTTACTTCCCCAGTGAGTACGGCCTGGGATGGTGTAACAACTCTTGCAGAACTTTTTGATCAGGCTTGTAAGCAGCATCGAGATAGATTTTTGCTTGGGACCCGGAAATTGATGTCAAGGGAGGTTGAAATAACTGAAGACGGAAGGTCTTTTGAGAAATTGTCGTTGGGAGACTATCAATGGTTGACATATGGGGCAACATTTGAAGCTGTCTGTAATTTTGCCTCTGGTTTGGCAAACATTGGGCATGTAAAGGAAGAACGAGCGGCAATCTTTGGTGACACAAGGGAAGAATGGTTTATTGCATTACAGGGTTGCTTTAGGCGCAATATTACAGTTGTGACTATTTATGCATCATTAGGAGATGAAGCTTTATGTCACTCATTAAATGAGACAGAGGTGACGACTGTGATTTGTGGGCCAAAAGAATTGAGGAAACTGGTACATATAAGTGGGCAACTTGACACAGTGAAACGTGTGATATGCATGGATGATGATATCCCATCTGACACCACATCTATTGAGCATGGCTGGACAATCACTTCCTTCACTGATGTTGAGAGACTTGGTAAAGAAAATCCTGTTGATGCTGATTTACCTCTTTCATCTGATGTTGCAGTTATAATGTACACAAGTGGAAGTACAGGACTGCCTAAGGGAGTGATGATGACACATCGTAATGTCTTAGCAACGGTCTCTGCTGTCATGACAATTGTTCCTAACCTTGGGAACAATGATATTTATCTAGCATACTTACCTATGGCTCATATTCTTGAATTAGCTGCTGAGAATTTAATTGCAGCTGTTGGAAGTGCCATAGGATATGGAACTCCTTTGACTCTAACTGATACTTCAAGCAAGATTAAAAAGGGAACAAAGGGGGATGCCACTGTGTTGATGCCAACTTTAATGGCAGCTGTACCAGCAATTCTTGATCGTGTTCGTGATGGAGTGCTTAAGAAGGTAAATGCAACTGGAGGATTATCTAAGAAATTGTTTGATTTAGCCTACACACGTAGGTTGCAAGCAATTAATGGTAGCTGGTTTGGTGCTTGGGGATTGGAAAAGGCTCTCTGGGATGCTCTAGTGTTCAAAAAGGTCAGAGCAATTCTGGGTGGTCGTATCCGTTTTATATTGTCTGGTGGGGCTCCTCTTTCTGGCGATACCCAAAGATTCATCAATATTTGTCTTGGTGCTCCAATTGGTCAAGGATATGGTCTCACAGAAACTTGTGCTGGCGGCACATTCTCTGATTTTGATGATACATCAGTTGGTCGTGTGGGACCACCTCTTCCATGCTCTTTTATAAAGCTAATCAACTGGCCGGAAGGTGGATATTTGACTGATGATTCACCAATGCCCCGTGGTGAAATTGTAATTGGTGGTCCAAATGTCACTCTTGGATACTTTAAAAATGAAGAAAAGACAAGAGAATCATACAAGGTTGATGAAAGAGGAATGAGATGGTTTTACACAGGTGACATAGGGAGATTCCATCCAGATGGTTGCCTTGAGATTATTGATCGTAAAAAGGACATAGTTAAACTGCAGCATGGTGAATATGTCTCCTTAGGAAAGGTTGAGGCGGCTCTTAGTGTCAGCCCCTATGTAGACAATATTATGTTGCATGCTGACCCTTTCCATAGTTACTGTGTGGCACTTGTCGTGGCTTCTCAGTCTGCATTGGAGGAATGGGCTTCGAGGGAAGGCATTGCTTATTCTGATTTTGCAGAATTGTGTAGTAAAGAAGAAACTGTTAAGGAAGTACATGCATCACTTGTAAAGGAAGCAAAGAAAGCTCGTTTGGAGAAATTTGAGATACCTGGAAAAATTAAATTGCTTTCTGACCCGTGGACTCCTGAATCTGGCCTAGTCACTGCAGCTCTCAAGATCAAGAGAGAAGCCATCAGAAAGGCCTTCGCTGAAGAACTGGCGAACTTATATGCTTCATAA 2088 0.4253 MSAYVVGVIVPLLVTILFRNSKNVKKRGLPVDVGGEPGVAIRNHRFTSPVSTAWDGVTTLAELFDQACKQHRDRFLLGTRKLMSREVEITEDGRSFEKLSLGDYQWLTYGATFEAVCNFASGLANIGHVKEERAAIFGDTREEWFIALQGCFRRNITVVTIYASLGDEALCHSLNETEVTTVICGPKELRKLVHISGQLDTVKRVICMDDDIPSDTTSIEHGWTITSFTDVERLGKENPVDADLPLSSDVAVIMYTSGSTGLPKGVMMTHRNVLATVSAVMTIVPNLGNNDIYLAYLPMAHILELAAENLIAAVGSAIGYGTPLTLTDTSSKIKKGTKGDATVLMPTLMAAVPAILDRVRDGVLKKVNATGGLSKKLFDLAYTRRLQAINGSWFGAWGLEKALWDALVFKKVRAILGGRIRFILSGGAPLSGDTQRFINICLGAPIGQGYGLTETCAGGTFSDFDDTSVGRVGPPLPCSFIKLINWPEGGYLTDDSPMPRGEIVIGGPNVTLGYFKNEEKTRESYKVDERGMRWFYTGDIGRFHPDGCLEIIDRKKDIVKLQHGEYVSLGKVEAALSVSPYVDNIMLHADPFHSYCVALVVASQSALEEWASREGIAYSDFAELCSKEETVKEVHASLVKEAKKARLEKFEIPGKIKLLSDPWTPESGLVTAALKIKREAIRKAFAEELANLYAS 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g2503 695 Pfam AMP-binding enzyme 102 562 IPR000873 -
Dere05g2503 695 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 42 693 - -
Dere05g2503 695 ProSitePatterns Putative AMP-binding domain signature. 253 264 IPR020845 -
Dere05g2503 695 SUPERFAMILY Acetyl-CoA synthetase-like 55 693 - -
Dere05g2503 695 CDD LC_FACS_euk1 102 681 - -
Dere05g2503 695 Coils Coil 682 695 - -
Dere05g2503 695 Gene3D - 51 554 IPR042099 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g2503 Dere-ChrDere05 35582888 35588310 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g2503 148 694 Acyl Lipid Metabolism Gene Families AT1G77590 80.073 0.0 936
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g2503 05 35582888 35588310 Dere05g2503 05 35582888 35588310 ECH