Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g2500 ATGGATGCGTCAGTGCTGCAACGCATCTCCGAGCTCGGAGTTCGTCTTGGCCAGCGAAGTCGTCCGAGCAAGGATTTCATCGTCAAATCTCTGCGACAAGCTGTGAGTGCTTTGTCTCAGTTAGAACAGTTCTCTCTTAGTGAAAACACCAACGAAGTGCAAGCTGGCAAAAAGAAAGAAGCTCTCAGAAAGCGAGAAGCTGCCCAAAATTTAGACGCTTCCTTAAAACCCCTGGAAAATGCGATCATTTCTGATCTGCTTCAACATGCAGATAAGGATGTTAGACTTCTAGTTGCTATATGTGTCACTGAAATTTTTAGGGTCAGGGCACCTGAACCACCTTTTGGAGACAAAGATTTAAAGGATGCATTTAAGCTTATCATTAGTGCGTTTGCGGATTTAGCTGATACCTCAAGTCCATTATTTTCGAAAAGGGTTAAGATATTGGACACTGTGGCTCGGTTAAAATGCACTGTGATAATGTTGGATATTGAATCTGAAGATCTGATTCTGGAGATGTTCAATATTTTCTTCTCTGTTGTAAGAGATGACCACCCAGCAAGTTTGATTAATGCTATATGTTCTATAATGACAGAGATATTAAATGTTGGAGCTTCTCAGCAACTTTTGGAAGTGATTTTACAAAATCTTTTAAAGAGCAGAAAAGATGCAACCTGTGCTGCTTCTCGACTAGCTGCTTCAGTCATCAATTGTACGGATGAGAAAGAGCTGAAGCCCCTTGTTTCTTGGTTTTTAACTTCTTGTATAAATGATAGAGATGCAGTGAGCTCTAGTTTGAAAGAATTTTATCACGAAATTATTTTCAAAATTTTCCAGTGCGCTCCTGAGATGCTTCTTGCTGTCATCCCAAGTTTGATTGGAGAACTATTGGCTGAACAGGTTGATGTTCGGATAAAAGCTGTTAATTTGGTTGGGAAGCTTTTTGCACTTCCTGAACGTCATGCTGCGCGGAAGTATCATGATCTTTTTGTGGAGTTCCTGAAAAGGTTTTCTGATAAATCTGTGGATGTTAGAATTAGTGCCTTGCAATGTGCCAAAGCTATTTATGTGGCAAATCCGTCTGGGAGGGAATTTCATGAAATTATTAGTAAGCTGCTCAGCAGTTATTCTTCTGCTGTTGAAGATCGATTACTAGATTTTGATGACAGAGTGAGAATGCAGGCGGTTCTTGTCGCCTGTGATCTTTCCAGGTCTAACCTGCAACTTGTTCCATCCAAATTAATATCTCAAGCCACTGAAAGACTCCGGGATAAAAAGATATCTGTTAGAAAGAGAGCCTTGCAAAAGCTTATTGAAGTATATCAAGATTACTGCATCAAGTGTTGTGAAGGCAGCATGACAGCAAGTGATCACTTTGAAGAGATTCCCTGTAAGATTATGATGCTTTGCTTTGATAAAGATTGTAAGGAATTCAGGTCACAGAACATGGAATTAGTTCTTGCTGATGATTTATTTCCGGGGCATCTTTCCTTGGAGGAAAGGACAAAGCACTGGATACACATGTTTTCTCTTTTCAGTCCTCTTCATGAAAAGGCATTAAATACTGTTTTAACTCAAAAGAGAAGGTTGCAAGATGAGATGAAGAACTATCTAGCTATGCGGAAGAAATTTAAGGAAAATTGTTCTGAAGATTTACATAAGACTGAAAGTATGTTTACAAAAATGGCATCATTTTTCCCTGATCCTCCCAAAGCAGAAGAGTGGTTACATAAATTGAACCAATTTAAAGATAATAATGTATTTAACTCCCTCGAACAATTTTTGGAGGAGCATACCTTTGCAACTGGACAAATCATCCAAGATAAACTTCTGAAAATGATAGGGGAGAGCAATCCGAATTTTGAGTTTCTACGTGCACTCTTCTCTAAATGTTCATACAACATTTTCAGCTCAGAGCATGTCCATTATATCTTAGATTATCTTTCCAATTCCTCAATTGGAAACAAGCACTTGGAGGATTCTTCTGTAAAGCTTCTCCTGGCCATTGTTAGAACTTTTCCTGCGATCCTGAAAGACTCTGAAAAGCAGTTCCAAATGTTGTTGGAGCAGAAGAGCCCAGTTAATGACAGGCTGATAGAGGTCTTAGCATTGGCAGGCTCTCACATTTCCCTCAAACTCAGTGATATTTACCCATTTCTTGAGAAAATTTGCTTGGAGGGAACTCGCACACAGGCTAAATTTGCTATCTCGGCAATCGCTGCTTTAAGTTCTGATCAAACAATTTTCTCAAGTCTATATGAGGGACTCATTGTTTCTTTGTATAACCATTGCAATGTTCCAACAGTTTTGCAGTCTTTGGGATGCATTGCACAAAAATCTGTTAAAACTTTTGAAGCTCGAGAGGAGGAGATTACATCATATATTTGTCAGAAGATGATACAAGTGGAGCACTTAGATGATGTTCATGATGCAACATCGCTGGATGATACTTTCCAGTGTAGCAATTCCTGCCAATTGAAGATGGTGCAATTTGTTAGCCATTGTGCAATCATTCTAGCACCTACTTTTGCAGATTTATGGGCTAAAAACACTAGTAAAGAGTTTTCTGCCGGACCAAGGAAACTGTGTGAGACAGAATATTTATGGTTTGTTGGACATTTTGTTGAGAATGCTGCAGCAGAGTGCTTTGATTCAGATGCGCTGAAGATTACTGATTACATACATGGTAAGACATATTGTGCGTCTGATGCAGCCCCGGACTTTACCAGGGAATGTGACTGGGCTCCCATCAGATTAGCTGCTGCGAAGTCAATTCTCCGGCTGTCTAAGAAGTGGGATCAGCATATTTCTCCAGAGATTTTTCGCTTCACTATTTTGATTGCGAAGGACTCCTCTTATTCTGTTAGGAGATCATTTCTAAATAAAGTAAATAAGATGTTGAAGGAGCGTAGGCTACCCATTAGATATGCATGCGCTTTTCCATTGGCCGTGACGAATAGCATCGAGGATCTACAATATCTTGTCTTCCGCCTTTCCAGTCTCATACAGGAACTGTTACTTCAGAATAAACTGGCTGGCCAATTTATCAAAGATTACAGCATAGTTGCTCGACTACGGCAAATTTCTGCTGTGCAAGGGGCAATTTTTGGTTACCCTTCATACATTGTCGTCTTTCTGATTTATGTTCTTGCTCATGATACTGGCTTTCCATCTGAAGGCTGTCAAGATGAACAAATATATGCTGAACTCTGCAGTCCACTCTTTTTTTTGATGCAGGCATTAGTCAATTCAAGTATTGTTGATGGTGACCTGGACCTTGTTAATGATGCTGTATTATATCTGTTTAGTATTTTACGAGCTATCAGAAAAGCTGAGGATACAGTTGATGTGCAAAAGACTATTAAGCTGCATATGCTGGCTGACATTGGCATATTTTTTTTAAATGCATTTAAACATGGTGAAATTTCTGCATCGCAAGCCCCTGGACAAATTTTGCTGCCTTCGTCATTATATAGAATAAGTTCTCCACAGAATAATGCTAATTCCAAAAAGTCCTATTTTGATGAATGCTTTCTGGGTAGCCTCTTGCAAAAACTTAAATCTTCTGTCCCTCAGGCATGTATTCAGAAGCCTGCTAAAACTCTTAAATATGGTCGCAAATGTCAAGAGGATGTTCAAAAGTCCAAACTTAACACTTACATTGTATCAAATTTGGCTAGCAAACCGGATGATTTGTTAAGGAGGGAAACAACACATGCAAAGACTGTAAGCCCTAATATTCCTTCAGGGCAAAGGATAAAACGTGCTGTGTCTTCGACTGGTTCTGGCTCAATTGGTTTGCACGAATGCTCCACTCTTGATAAGCAACAGAATATTGTTTCTAAACATTGTGAAAGAACTCTGGAAGGAAACCAACTTTCATCTTGTGGCTCTGTGAGCTTGAAAGGTTCTCTGGTTGAATCACATGTTTCAACCCGTAAGTCAAAAAGAGCAGCTGCTTCTTTGATGGAAAACACTAAGACAAGCTGCAAATATACTGTTAAACCTTCAAAGTGCCCCAGAACCAACCTCAAGGATACTTGTGGCTCAAAGAAGGAAGATATACTGGCAGACCGTTCAAATGAATGTCACTTATGGCACTGTGGTGCTGATAAACATTCTTACCTTAGTCTAAAGAAAACTACTGCTACAACAGGAGGCGGAGTAACCAAAAAGGGAATATCACTTGACCAAGAAAATGCAAATGAGAATGGAAAGGGAAAACCTACGGGGACTTCAGAATCAGAGGTTGTCAATACAAATGCAAAAGCTGCATCTCGGTCAAGACGAAAAGGATTAATAGAGATTTTGTAG 4314 0.3957 MDASVLQRISELGVRLGQRSRPSKDFIVKSLRQAVSALSQLEQFSLSENTNEVQAGKKKEALRKREAAQNLDASLKPLENAIISDLLQHADKDVRLLVAICVTEIFRVRAPEPPFGDKDLKDAFKLIISAFADLADTSSPLFSKRVKILDTVARLKCTVIMLDIESEDLILEMFNIFFSVVRDDHPASLINAICSIMTEILNVGASQQLLEVILQNLLKSRKDATCAASRLAASVINCTDEKELKPLVSWFLTSCINDRDAVSSSLKEFYHEIIFKIFQCAPEMLLAVIPSLIGELLAEQVDVRIKAVNLVGKLFALPERHAARKYHDLFVEFLKRFSDKSVDVRISALQCAKAIYVANPSGREFHEIISKLLSSYSSAVEDRLLDFDDRVRMQAVLVACDLSRSNLQLVPSKLISQATERLRDKKISVRKRALQKLIEVYQDYCIKCCEGSMTASDHFEEIPCKIMMLCFDKDCKEFRSQNMELVLADDLFPGHLSLEERTKHWIHMFSLFSPLHEKALNTVLTQKRRLQDEMKNYLAMRKKFKENCSEDLHKTESMFTKMASFFPDPPKAEEWLHKLNQFKDNNVFNSLEQFLEEHTFATGQIIQDKLLKMIGESNPNFEFLRALFSKCSYNIFSSEHVHYILDYLSNSSIGNKHLEDSSVKLLLAIVRTFPAILKDSEKQFQMLLEQKSPVNDRLIEVLALAGSHISLKLSDIYPFLEKICLEGTRTQAKFAISAIAALSSDQTIFSSLYEGLIVSLYNHCNVPTVLQSLGCIAQKSVKTFEAREEEITSYICQKMIQVEHLDDVHDATSLDDTFQCSNSCQLKMVQFVSHCAIILAPTFADLWAKNTSKEFSAGPRKLCETEYLWFVGHFVENAAAECFDSDALKITDYIHGKTYCASDAAPDFTRECDWAPIRLAAAKSILRLSKKWDQHISPEIFRFTILIAKDSSYSVRRSFLNKVNKMLKERRLPIRYACAFPLAVTNSIEDLQYLVFRLSSLIQELLLQNKLAGQFIKDYSIVARLRQISAVQGAIFGYPSYIVVFLIYVLAHDTGFPSEGCQDEQIYAELCSPLFFLMQALVNSSIVDGDLDLVNDAVLYLFSILRAIRKAEDTVDVQKTIKLHMLADIGIFFLNAFKHGEISASQAPGQILLPSSLYRISSPQNNANSKKSYFDECFLGSLLQKLKSSVPQACIQKPAKTLKYGRKCQEDVQKSKLNTYIVSNLASKPDDLLRRETTHAKTVSPNIPSGQRIKRAVSSTGSGSIGLHECSTLDKQQNIVSKHCERTLEGNQLSSCGSVSLKGSLVESHVSTRKSKRAAASLMENTKTSCKYTVKPSKCPRTNLKDTCGSKKEDILADRSNECHLWHCGADKHSYLSLKKTTATTGGGVTKKGISLDQENANENGKGKPTGTSESEVVNTNAKAASRSRRKGLIEIL 1437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g2500 1437 MobiDBLite consensus disorder prediction 1390 1437 - -
Dere05g2500 1437 MobiDBLite consensus disorder prediction 1390 1426 - -
Dere05g2500 1437 Gene3D - 24 474 IPR011989 -
Dere05g2500 1437 Pfam Sister chromatid cohesion protein PDS5 protein 25 828 - -
Dere05g2500 1437 Pfam Sister chromatid cohesion protein PDS5 protein 908 1159 - -
Dere05g2500 1437 SUPERFAMILY ARM repeat 82 764 IPR016024 -
Dere05g2500 1437 Coils Coil 527 547 - -
Dere05g2500 1437 CDD PDS5 27 674 - -
Dere05g2500 1437 PANTHER ANDROGEN INDUCED INHIBITOR OF PROLIFERATION AS3 / PDS5-RELATED 5 1334 IPR039776 GO:0007064
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g2500 Dere-ChrDere05 35545667 35569211 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g2500 05 35545667 35569211 Dere05g2500 05 35545667 35569211 ECH