Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g2479 ATGATAGCATCCTGTAATTCTGTAAATGAGATACATGGGGTGTCATCGGAGTGCTCAGGAAATGTCAGGACACCTACTCATGCAACTGCTTTGTCAGACAACCCTCAACTGAAGCAGCAGGAGGTCAAGATTTGTTCCCCTAATGAGCAAGGGCTGTCCAGAGCATCAAATGTGGCTTTCACTTCAGCGCCACCGATGCATATCAACGAGCATCAAATGGACACTGTGGATTTGCAAAAGATGCAACTGCATGGTGGAGGAGTGTGCTCAAAATCATGTTCTGAGCCAGTTGACTCATCAGGAACTTATGCAAACAAAGACTTGTTTCCTTCTGGTCAGATGGGGGTTTGTGCCCAGAGAAGTTACTTTAGTCCACACTGGTCGAGGGAGGCTGTTGAGAAGGCTTTAGAGAAGGGTGATGTTTTCAAATCCCTGTTCCGTGTCAATGCTCACAATAGGCTTGAGGCGTATTGTAAAATTGATGGAGTGCCAACAGATGTTCTCATCAGTGGAATTCCTGCCCAGAACAGAGCAGTCGATGGTGATATTGTTGCAGTTAAGATAGATCCTTTGTCATTGTGGACTAAAATGAAAGGATCAAATGGTACTGGTAATATTTCTGCACCACTTGAAGATTGTAACCTGCTCACAGAAGATAATGAAGTGGAGGGAAACATATCTATAGGAAAAGGTAAGGTAGATGCTGATTCTGAGTCTGCTAATTATAGAAGCTGCTCTGGTCAAAACAAGGAGGATGTGAATCATGACCCCAATACTTATGGAACTTCAATTGGACCTACTAGTCACAATGGTCTTGATGCTGCTTCTGATAAGTTAAATGTCAGTTCTTGTACTGGACAGGGTGAAGTTATTAATGCAGTGGAAAACATGTGTTCGTTGGTTAATTCTTTCCCTTCTAAAAGACCAACTGGCAGGGTGGTTTCAATTGTTGAGAGGTCTCCACGACGGGAGTCCATTGTTGGCCATCTTAATGTTAAGCAGGGTTTTTCTTTTAAGGAGATAAGCAGAAAAGATGCAAAGAAGACTAAAAAATTGGTTTATGAATGTGAGTACATCCCGTTGACGCCAACTGATCCGAAGTTGCCAAAAATGATGCTTCTGGTTAGTGAGTTGCCTAACTCCATAAAGAAAAGGCTACAAAGTGGGGATGCGACAATTGAAATGGATCTGGTAGCTGCACAAATTGATAACTGGTTTGAAGAAAGTCCTTGTCCACATGCTCATGTCTTGCATATTTTTGGACGAGGTGGTGAAATTCAGCCACAGTTAGATGCCATTTTATTTGAGAATGCTATCTGTGTGTCTGAGTTTTCACCTGAAGCTCTGTCCTGCCTTCCGTTTGTTTCTTGGGAGGTGCCACAGAATGAATTTCAAAGTAGAATGGATCTTAGAAATTTGTGCATATTTACCATTGATCCTTCAACTGCTACTGAGCTGGATGATGCACTGTCCATTGAGAAGTTATCTAATGGAAATTTTAGAGTAGGTGTCCACATTGCTGATGTGTCATACTTTGTTTTACCTAACACAACCTTAGACAGCGAGGCTCAGTCTAGGTCAACAAGTGTCTATATGGTGCAAAGGAAGTTACCGATGTTGCCGGCTTTGTTCTCAGAGAACATAGGTTCACTGAATCCTGGAGTGGATCGACTTGCGGTTTCCATGCTCCTGGACATAAGCCTTGATGGGGATGTTGTTGATCGTTGGATTGGCCGTACTGTGATACACTCTTGTTGTAAGCTTTCATATGAACATGCGCAGGACATTATTGATGAAGTTATTGATGTTGACAGTTTGAACACAATAGGAGATCACTATCCTAAGGTGCATGGCCAGTTTGAATGGCCTGATGTCATTGCGTCTGTGAAGAGTCTTTATGAAATTTCAAAAGTTTTAAAAGATAAGAGGTTTAATGATGGGGCTTTACGGCTTGAAAGCCCCAAAGTTGTTTTTCTGTTTGATGAATATGGAATTCCTTATGATTGTATGCTCTCTGAACGTAAAGAATCAAATTTTCTTGTTGAAGAATTTATGCTTCTGGCTAATAGAACGGCTGCTGAAGTCATATGTAGAACATATCCTGATGGTGCATTATTGCGCAGGCATCCTGAACCTAATTTGCGAAAGCTTAGAGAGTTTGAGGCATTTTGTCATAAACATGGTCTAGATCTGGACACATCTTCATCTAGTCGGTTCCATTGGTCATTAGAGCAGATCAGGGAAAAGCTTAAGGGTGATCCTACGCTCTGTGATATTCTTATTTCATATGCTACAAGGCCAATGCAGTTGGCGTCATATTTCTGTAGTGGGGATTTAAAGGACAAACAAAATGGCTGGGGTCATTATGCATTGGCTCTCTCTGTTTACACTCATTTTACATCACCTCTGCGTCGGTATCCTGATATCATTGTTCATCGGACACTGCTTGCTGCTATAGAGGCTGAGGAAATGTATCTGAAGCACCAAAAAACATTGCAGGCTGACAAGGGAGAGGAAGTGCAAAGGAGATATTTCACTGGTATGATCTTTGGTAAAGAAGCTGCAGAATCTGTGGAAGGGAAAAATGCGTTATCAACTGCAGCTTTGAAGCATGGAGTTCCGTGTACTGAATTACTTGCAGATGTTGCTGCTTATTGCAATGAGAGAAAGCTAGCTAGTAGAAACGTTAAGGATGCTTGTGTTAAACTCTACATGTGGTTTCTCCTCAAGAAGGAGGTGTTGTTATCTGAAGCAAGAATATTGGGACTAGGCCCGAGGTTCATGTCAATATATGTTCAAAAGCTAGCTATTGAGCGGCGGATATATTATGATGAAGTTCAAGGCTTGATTGTGGAATGGCTTGATGCGACATCCACTTTGTTACTTAGCATGTGTACTGATAAACGGGCTTTTAGGAGGGGTAGTTATGGTAAATGGAGGGCATTTGAAGAAGTTGTGTTGCTCTCTTGTCCGTGTGACCTGAAAGTTGCTAAAGTCAGTTCTAATGAGCGTGATGCAGTGGACATGGGAGATGGTATTGCTGCTATAGACAGGGATATCACTTCCAGATCAGACAGTTCGGGGATTGAAATTGGCCCTGCAGTTTTCCCTCTCACTCTGCGTCTTCTTTCAACGGTTCCAGTGGCACTTCATGCCGTTGGTGGCGATGATGGAGCACTCGATATTGGGGTGAGGTTGTACATGAGCTCCTATTTAAGGTAA 3222 0.4236 MIASCNSVNEIHGVSSECSGNVRTPTHATALSDNPQLKQQEVKICSPNEQGLSRASNVAFTSAPPMHINEHQMDTVDLQKMQLHGGGVCSKSCSEPVDSSGTYANKDLFPSGQMGVCAQRSYFSPHWSREAVEKALEKGDVFKSLFRVNAHNRLEAYCKIDGVPTDVLISGIPAQNRAVDGDIVAVKIDPLSLWTKMKGSNGTGNISAPLEDCNLLTEDNEVEGNISIGKGKVDADSESANYRSCSGQNKEDVNHDPNTYGTSIGPTSHNGLDAASDKLNVSSCTGQGEVINAVENMCSLVNSFPSKRPTGRVVSIVERSPRRESIVGHLNVKQGFSFKEISRKDAKKTKKLVYECEYIPLTPTDPKLPKMMLLVSELPNSIKKRLQSGDATIEMDLVAAQIDNWFEESPCPHAHVLHIFGRGGEIQPQLDAILFENAICVSEFSPEALSCLPFVSWEVPQNEFQSRMDLRNLCIFTIDPSTATELDDALSIEKLSNGNFRVGVHIADVSYFVLPNTTLDSEAQSRSTSVYMVQRKLPMLPALFSENIGSLNPGVDRLAVSMLLDISLDGDVVDRWIGRTVIHSCCKLSYEHAQDIIDEVIDVDSLNTIGDHYPKVHGQFEWPDVIASVKSLYEISKVLKDKRFNDGALRLESPKVVFLFDEYGIPYDCMLSERKESNFLVEEFMLLANRTAAEVICRTYPDGALLRRHPEPNLRKLREFEAFCHKHGLDLDTSSSSRFHWSLEQIREKLKGDPTLCDILISYATRPMQLASYFCSGDLKDKQNGWGHYALALSVYTHFTSPLRRYPDIIVHRTLLAAIEAEEMYLKHQKTLQADKGEEVQRRYFTGMIFGKEAAESVEGKNALSTAALKHGVPCTELLADVAAYCNERKLASRNVKDACVKLYMWFLLKKEVLLSEARILGLGPRFMSIYVQKLAIERRIYYDEVQGLIVEWLDATSTLLLSMCTDKRAFRRGSYGKWRAFEEVVLLSCPCDLKVAKVSSNERDAVDMGDGIAAIDRDITSRSDSSGIEIGPAVFPLTLRLLSTVPVALHAVGGDDGALDIGVRLYMSSYLR 1073
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g2479 1073 PANTHER RIBONUCLEASE 71 1070 - -
Dere05g2479 1073 Gene3D - 337 425 - -
Dere05g2479 1073 ProSitePatterns Ribonuclease II family signature. 788 812 IPR022966 -
Dere05g2479 1073 Pfam RNB domain 467 819 IPR001900 GO:0003723|GO:0004540
Dere05g2479 1073 SUPERFAMILY Nucleic acid-binding proteins 429 911 IPR012340 -
Dere05g2479 1073 SUPERFAMILY Nucleic acid-binding proteins 310 439 IPR012340 -
Dere05g2479 1073 Gene3D - 117 208 - -
Dere05g2479 1073 MobiDBLite consensus disorder prediction 239 257 - -
Dere05g2479 1073 SMART RNB_2 467 821 IPR001900 GO:0003723|GO:0004540
Dere05g2479 1073 FunFam DIS3-like exonuclease 2 113 214 - -
Dere05g2479 1073 Pfam Dis3-like cold-shock domain 2 (CSD2) 360 437 IPR041505 -
Dere05g2479 1073 MobiDBLite consensus disorder prediction 237 257 - -
Dere05g2479 1073 SUPERFAMILY Nucleic acid-binding proteins 121 319 IPR012340 -
Dere05g2479 1073 Hamap DIS3-like exonuclease 2 [DIS3L2]. 22 1048 IPR028591 GO:0000175|GO:0034427
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g2479 Dere-ChrDere05 35302748 35307797 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g2479 05 35302748 35307797 Dere05g2479 05 35302748 35307797 ECH