Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g2464 ATGCTTCCTCCTATACCCGCCGCCGCCTCCACTGCCGTTAGATCCGATTCGATATCCCGCCCGACCAATCACGGTCATAGTAATCAAAACAGTGAGTACGGACGGCTGAGTCAGCGAGAGCAGCAACAGCCAGTGGTGGACTTGAAGATTAACGACTTGGTGGGGAATGGAATCTCGGGGATACTTTACAAGTGGGTCAATTATGGCAAAGGTTGGAGGCCTCGATGGTTCGTGCTTCAGGATGGTGTTTTGTCGTACTATAAGATTCACGGGCCCGATAAGATCATTGTCAATCACGAAACCGAGAAGAGGTCCAAGGTTATCGGCGAAGAATCCATGCGAAGGATCTCTCGCAACCAGAATTCCTCTTCCTATCATCAGCACTCCAACCGTCGACGGAAGCCCTTTGGAGAAATCCATCTCAAGGTTTCAACTATTCGTGAAAGCAAATCCGATGACAAGCGCTTTTCTATTTTCACTGGAACGAAGAGACTTCACTTAAGGGCCGAGACTCGTGAAGATCGAGTGGCATGGATGGAGGCCCTGCAGGCAGTAAAAGATATGTTCCCTCGGATATCCAACAGTGAGTTGATGGCTCCGTTAGATAATGTAACCATTTCAACTGAGAAACTTAGAAAGAGGCTACTAGAAGAAGGTGTCAGTGAGGCAGTCATCCAGGATAGCGAGCAAATTATGAGAAATGAGTTTTCAGCACTGCAAACCCAACTTGTGCTGCTTAAGCAGAAGCAGTGGATTCTGATTGACACGTTACGACAATTAGAGACAGAAAAGGTTGATTTGGAGAATACAGTTGTCGATGAGAGCCAAAGACAGTTGAATGATCAAGAGGAGTCCTCTCTTTTGAGGCAGGAAAAATTCAGTGAAGGAAGTGCAAGTGAATCTGAGGATGATAATGAGAGAAATGATGTTGCAGAAGAAGAAACAGATGATGATGACAATGCCTTCTTTGACACCCGTGATTTTCTATCATCTAGTTCATTTAAAAGTAATGGGTCTGATTTTAGGGTATCATCTTTCTCTTCCGGTGATGATGGGCTTTATGCAGTTGAATCAGAGGAAGAATTAGATCCTTTGATTAGATCTGTTGCAACCAACTATCCTTATGTTAAGCGGCGTAAGAAATTGCCTGAACCTATCGAAAAGGAGAAAGGTGTCAGTCTTTGGTCGATGATTAAGGATAATATTGGGAAGGATTTAACAAAAGTATGTCTGCCTGTTTACTTTAATGAGCCTATATCCTCTCTACAAAAATGTTTTGAAGAAATGGAGTATTCAAATCTCCTGGATCGTGCATATGAATGGGGAAGAAGGGGAAATAGCCTCTTGAGGATTCTGAATGTAGCTGCTTTTGCTGTATCTGGCTATGCTTCAACTGAAGGGAGGATTTGCAAACCATTTAATCCATTATTAGGGGAAACATATGAGGCTGATTATCCAGATAAAGGCCTCCGATTTATCTCAGAGAAGGTCAGTCATCATCCAATGATAGTTGCATGTCACTGTGAGGGTACAGGTTGGAAATTTTGGGCAGATAGCAACTTAAAGAGCAAATTTTGGGGCCGATCAATTCAGCTTGATCCTGTTGGTATCTTGACTTTGGAATTTGATGATGGGGAAGTTTTCCAGTGGAGTAAGGTTACAACATCAATATACAATCTCATACTGGGAAAGCTATACTGTGATCATTATGGTACAATGCGTATACAGGGAAATCAAGAATACTCATGTAAATTGAAATTCAAAGAACAATCTATAATTGATCGAAATCCTCACCAGGTACAGGGTATTGTTCAAGACAGGAAGGGGAAGACGGTGGCAACTTTATTTGGAAAATGGGATGAAAGCATGCATTATGTCAATGGAGATTGCACTGGAAAGGGGAAAGGTTATGACTCTTTGTCAGAAGCCCATCTACTCTGGAAACGGAGCAAGCCTCCCAAATTTCCCACTAGATATAACTTTACTCGCTTTGCCATCACATTAAATGAACTTACCCCTGGATTGAAGGAAAAGTTGCCACCTACAGATTCCAGGCTAAGACCGGACCAAAGGTATTTGGAAAATGGTGAGTATGAGATGGCAAATTCAGAGAAGTTACGACTAGAGCAGCGGCAACGTCAGGCTCGAAAGATGCAAGAAAGGGGTTGGAAACCACGGTGGTTCGCCGTAGATAAAGCAAGTGGTACATACCGTTACTTGGGAGGATATTGGGAGGCCAGGGAACGAGGAAGCTGGGATTCCTGCCCTGACATTTTTGGCCAAATCCCTTCCGATCATCTTTCTGACTGA 2310 0.4342 MLPPIPAAASTAVRSDSISRPTNHGHSNQNSEYGRLSQREQQQPVVDLKINDLVGNGISGILYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVNHETEKRSKVIGEESMRRISRNQNSSSYHQHSNRRRKPFGEIHLKVSTIRESKSDDKRFSIFTGTKRLHLRAETREDRVAWMEALQAVKDMFPRISNSELMAPLDNVTISTEKLRKRLLEEGVSEAVIQDSEQIMRNEFSALQTQLVLLKQKQWILIDTLRQLETEKVDLENTVVDESQRQLNDQEESSLLRQEKFSEGSASESEDDNERNDVAEEETDDDDNAFFDTRDFLSSSSFKSNGSDFRVSSFSSGDDGLYAVESEEELDPLIRSVATNYPYVKRRKKLPEPIEKEKGVSLWSMIKDNIGKDLTKVCLPVYFNEPISSLQKCFEEMEYSNLLDRAYEWGRRGNSLLRILNVAAFAVSGYASTEGRICKPFNPLLGETYEADYPDKGLRFISEKVSHHPMIVACHCEGTGWKFWADSNLKSKFWGRSIQLDPVGILTLEFDDGEVFQWSKVTTSIYNLILGKLYCDHYGTMRIQGNQEYSCKLKFKEQSIIDRNPHQVQGIVQDRKGKTVATLFGKWDESMHYVNGDCTGKGKGYDSLSEAHLLWKRSKPPKFPTRYNFTRFAITLNELTPGLKEKLPPTDSRLRPDQRYLENGEYEMANSEKLRLEQRQRQARKMQERGWKPRWFAVDKASGTYRYLGGYWEARERGSWDSCPDIFGQIPSDHLSD 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g2464 769 MobiDBLite consensus disorder prediction 12 40 - -
Dere05g2464 769 SUPERFAMILY PH domain-like 58 187 - -
Dere05g2464 769 Pfam Pleckstrin homology domain 63 183 - -
Dere05g2464 769 SMART PH_update 56 189 IPR001849 -
Dere05g2464 769 Coils Coil 698 721 - -
Dere05g2464 769 MobiDBLite consensus disorder prediction 276 304 - -
Dere05g2464 769 Gene3D - 56 189 IPR011993 -
Dere05g2464 769 FunFam Oxysterol-binding protein-related protein 2A 690 761 - -
Dere05g2464 769 CDD PH_ORP_plant 58 194 - -
Dere05g2464 769 ProSiteProfiles PH domain profile. 55 187 IPR001849 -
Dere05g2464 769 MobiDBLite consensus disorder prediction 276 322 - -
Dere05g2464 769 MobiDBLite consensus disorder prediction 305 321 - -
Dere05g2464 769 SUPERFAMILY Oxysterol-binding protein-like 388 765 IPR037239 -
Dere05g2464 769 Coils Coil 257 277 - -
Dere05g2464 769 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 57 747 IPR000648 GO:0008289
Dere05g2464 769 FunFam oxysterol-binding protein-related protein 1D isoform X1 479 651 - -
Dere05g2464 769 Gene3D - 479 654 - -
Dere05g2464 769 Gene3D - 690 749 - -
Dere05g2464 769 Pfam Oxysterol-binding protein 393 748 IPR000648 GO:0008289
Dere05g2464 769 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g2464 Dere-ChrDere05 35149828 35156310 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g2464 05 35149828 35156310 Dere05g2464 05 35149828 35156310 ECH