Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g2432 ATGCAGATGCTACCTCCGGTAGAGGAGAATTTGACTATTCTAAGTCCAGAGGCAGTGTCTAAGAAGGGGCTGCTCTGTTGGAAGACTTTCCAAGAGAGGAAAGCTGATATTCAGACAGGAATCCCTCGCAGTGTCAACATGGAGAACCTGCAGAATGAATATTTGTTTCCTGAGATATTCATGCGAGAAACTGAACATGCTCAGAAGAATCCACATGCGAGAGTAATCAGACTTGGTATTGGTGATACCACTGAACCAATACCACACATCATAACTTCTGCTATGGCTGAGAAAGCACATGCTCTATCAACAGTTGAAGGTTACAGTGGATATGGACTAGAGCAAGGAAACTGGGCTTTAAGGAAGGCAATAGCTGAAACATTTTACCAAGATTCACGAGTGAAGGCGAATGAGGTTTTTGTATCTGATGGTGCGCAGTGCGATATTTCGCGCATTCAGACGCTTCTATCACCTACTTTGTCAGTGGCTGTGCAGGACCCAACTTTTCCGGCGTATGTAGATTCCAGTGTGATCGTTGGTAGAGCTGGCAGGTTCCAAGCAGAAACTGAGAAGTATAGAAACATTGTGTACATGAAGTGTGGGCCTGAAAATAATTTTTTCCCAGACATATCAGCTACTCCAAGAGCGGATGTCATTTTCTTTTGTTCTCCAAACAATCCGTCTGGTAATGCTGCAACTAGACAGCAGCTGAAGCAGCTTGTGGATTTTGCAAAAGCAAATGGATCCATAATCATTTATGATTCTGCATATGCTATTTACATATCGGATGAAAGCCCAAGATCAATATTTGAAATCCCTGGAGCCAAAGAGGTAGCAATTGAAATTTCATCATTCTCCAAATTTGCTGGTTTCACTGGGGTCCGCCTAGGCTGGACTGTTGTCCCCGAAGAACTATTCTATTCTGATGGATATCCTGTCATAAAGGATTATAATCGCTTAGTGTGCACCTGCTTCAATGGTGCATCAAGTATTGTTCAAGCTGGCGGTCTTGCTTGCCTTTCTGAAGAAGGTTTTCAAGGGCTAACTAACACCATTAATTATTACAAGGAGAATGCCAAAATTCTAGTTGACACATTTGGATCGCTTGGCCTGAAGGTGTATGGAGGCAAAAATGCACCTTACATATGGGTGCACTTCCCTGGGATGAAATCATGGGACGTGTTCAATAAGATTCTTGAGAGAACGAACATAGTCACCGTCCCAGGTGTGGGATTTGGTCCTGGCGGCGAGGAATTTGTTAGAGTTAGTGCATTTGGTCATAGAGAAAGCATATTGGAAGCTTCAAGGAGGCTGACAAAGCTTTTATAA 1329 0.4319 MQMLPPVEENLTILSPEAVSKKGLLCWKTFQERKADIQTGIPRSVNMENLQNEYLFPEIFMRETEHAQKNPHARVIRLGIGDTTEPIPHIITSAMAEKAHALSTVEGYSGYGLEQGNWALRKAIAETFYQDSRVKANEVFVSDGAQCDISRIQTLLSPTLSVAVQDPTFPAYVDSSVIVGRAGRFQAETEKYRNIVYMKCGPENNFFPDISATPRADVIFFCSPNNPSGNAATRQQLKQLVDFAKANGSIIIYDSAYAIYISDESPRSIFEIPGAKEVAIEISSFSKFAGFTGVRLGWTVVPEELFYSDGYPVIKDYNRLVCTCFNGASSIVQAGGLACLSEEGFQGLTNTINYYKENAKILVDTFGSLGLKVYGGKNAPYIWVHFPGMKSWDVFNKILERTNIVTVPGVGFGPGGEEFVRVSAFGHRESILEASRRLTKLL 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g2432 442 Gene3D - 85 342 IPR015421 GO:0003824
Dere05g2432 442 NCBIfam LL-diaminopimelate aminotransferase 44 440 IPR019942 GO:0008483
Dere05g2432 442 Gene3D Aspartate Aminotransferase, domain 1 55 438 IPR015422 GO:0003824
Dere05g2432 442 CDD AAT_like 76 438 - -
Dere05g2432 442 PANTHER AMINOTRANSFERASE 21 441 IPR019942 GO:0008483
Dere05g2432 442 FunFam LL-diaminopimelate aminotransferase, chloroplastic 85 342 - -
Dere05g2432 442 Pfam Aminotransferase class I and II 75 429 IPR004839 GO:0009058|GO:0030170
Dere05g2432 442 SUPERFAMILY PLP-dependent transferases 53 438 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g2432 Dere-ChrDere05 34757627 34762262 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g2432 05 34757627 34762262 Dere05g2432 05 34757627 34762262 ECH