Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g2392 ATGGCCGTCGGTGGTTTCGCCGTTGATGCACCTTCCAACGCCTTCGACGGCAAGATCACTCTCGCCGTCGTTATCACTTGCATCGTTGCTGCATCCAGTGGCCTCATTTTTGGATTTGACATCGGAATTTCAGGAGGCGTGACCACTATGGTACCATTCCTTGATAAGTTCTTCCCGTCAATACTGAGCAAGTCTCGTAGCGCCGAAACAAATGTGTACTGCGTGTATGACAGTCAAGTATTGACCTTATTCACGTCGTCGCTGTACCTAGCAGGGCTGGTTTCATCTCTAGCAGCCAGCCGAGTGACGGCCGCAGTGGGCCGGAGAAACACCATGATCCTCGGTGGCTGCACCTTCCTTGCTGGCGGTGCCATTAATGGCGGTGCTCAAAATATTGCCATGCTCATCTTGGGCCGTATCTTGCTCGGCCTTGGGGTCGGATTCACTAACCAAGCAGCACCGGTGTACCTATCGGAGGTCGCTCCACCCAAGTGGCGAGGTGCGTTCAACACAGGATTTCAATTCTTCATTAGTGTTGGTGTGGTCGCTGCCAACTGTATCAACTACGCCACTTCCAAGAAATCTTGGGGATGGCGACTATCACTCGGACTTGCTGTAGTTCCAGCTGCCATCATGACCATTGGTGCTTTCCTAATCACTGACACGCCTAGCAGCTTAGTCCAACGTGGCAAGATAGATCAAGCCAGAAATGCACTGCGCAAAGTGAGAGGCTCCTCTACTGACGTGGAACCCGAGTTGGATAACCTCATCAAATTGACCCAAAAATCAAAGGCTCTCCAGCAGGAGCCCTTCACCACCATATTTCAGAAACAATACCGACCTCACTTGGTCATGGCCTTTGCTATCCCATTCTTCCAGCAACTCACTGGCATTAATATCGTCGCCTTTTATTCAGCCAACCTCTTTCAGTCAGTGGGTTTTGGAAGCGACGCAGCTTTGCTTTCAACCATTATACTGGGAGTGGTTAACCTTGCATCTCTAATGGTGTCCACTGCCGTGGTCGATCGGTTCGGTCGAAGATTCTTGTTCATTGTGGGGGGCATTCAAATGCTTCTCTGTCAGATTGCGGTGGCTGTGGTGCTAGCACTTGCGAATAGTACGGTACACATATCGAAGAGCAACGCGACATTAGTGCTGGTGCTGCTGTGCTTATACGCTGCTGGATTTGGGTGGTCATGGGGCCCTCTGAGCTGGCTCATCCCCAGCGAAATTTTCCCCCTGAAAATCAGAACCACTGGACAAAGCATAAGCATTGCCATCAACTTCTTAACCATATTTGTATTGTCCCAGACATTTTTGACAATGCTGTGTCACTTTAAGTACGGTGCTTTCTTGTTCTATGCGGGTTGGATTGCCGTGATGACCGTCTTTATTGTACTTTTCTTGCCGGAGACCAAAGGAATTCCTCTCGAGTCCATGTATGCTGTCTGGGGAAAACACTGGCTCTGGCGTCGCTTTGTTGTTAAAGATGATAACCAAGATAATCTTTCCATGACTTGA 1521 0.4964 MAVGGFAVDAPSNAFDGKITLAVVITCIVAASSGLIFGFDIGISGGVTTMVPFLDKFFPSILSKSRSAETNVYCVYDSQVLTLFTSSLYLAGLVSSLAASRVTAAVGRRNTMILGGCTFLAGGAINGGAQNIAMLILGRILLGLGVGFTNQAAPVYLSEVAPPKWRGAFNTGFQFFISVGVVAANCINYATSKKSWGWRLSLGLAVVPAAIMTIGAFLITDTPSSLVQRGKIDQARNALRKVRGSSTDVEPELDNLIKLTQKSKALQQEPFTTIFQKQYRPHLVMAFAIPFFQQLTGINIVAFYSANLFQSVGFGSDAALLSTIILGVVNLASLMVSTAVVDRFGRRFLFIVGGIQMLLCQIAVAVVLALANSTVHISKSNATLVLVLLCLYAAGFGWSWGPLSWLIPSEIFPLKIRTTGQSISIAINFLTIFVLSQTFLTMLCHFKYGAFLFYAGWIAVMTVFIVLFLPETKGIPLESMYAVWGKHWLWRRFVVKDDNQDNLSMT 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g2392 506 PRINTS Sugar transporter signature 34 44 IPR003663 GO:0016020|GO:0022857|GO:0055085
Dere05g2392 506 PRINTS Sugar transporter signature 409 421 IPR003663 GO:0016020|GO:0022857|GO:0055085
Dere05g2392 506 PRINTS Sugar transporter signature 386 407 IPR003663 GO:0016020|GO:0022857|GO:0055085
Dere05g2392 506 PRINTS Sugar transporter signature 136 155 IPR003663 GO:0016020|GO:0022857|GO:0055085
Dere05g2392 506 PRINTS Sugar transporter signature 293 303 IPR003663 GO:0016020|GO:0022857|GO:0055085
Dere05g2392 506 Pfam Sugar (and other) transporter 27 484 IPR005828 GO:0016020|GO:0022857|GO:0055085
Dere05g2392 506 NCBIfam sugar porter family MFS transporter 22 479 IPR003663 GO:0016020|GO:0022857|GO:0055085
Dere05g2392 506 ProSiteProfiles Major facilitator superfamily (MFS) profile. 26 473 IPR020846 GO:0022857
Dere05g2392 506 Gene3D MFS general substrate transporter like domains 16 487 IPR036259 -
Dere05g2392 506 SUPERFAMILY MFS general substrate transporter 28 479 IPR036259 -
Dere05g2392 506 PANTHER SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER 14 494 IPR045262 GO:0015144
Dere05g2392 506 FunFam Sugar transport protein 13 16 487 - -
Dere05g2392 506 CDD MFS_STP 29 471 IPR044778 GO:0015145|GO:0015749
Dere05g2392 506 ProSitePatterns Sugar transport proteins signature 2. 141 166 IPR005829 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g2392 Dere-ChrDere05 34337093 34339872 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g2392 50 493 Organic Solute Cotransporters AT1G34580 67.778 0.0 612
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g2392 05 34337093 34339872 Dere05g2392 05 34337093 34339872 ECH