Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g2373 ATGTCCAGGCCCCTCCATCGAGGTGTATCTCGGATCCCTGACAGCAGTCCTGGGTTGTGGGACTCTCAATCCAAAAATAAAACAGAAAAAGAAGATTTTGATAGAAAGGGTTCTTCAGATCAAAGCTCTTTGGGCCTGAAATTTCCTCTGCGGTTGCTTTTTGCAGATAATTCTCATTCTAAATATGGTATCACTGAGAATGGTTTTACATCTGATCCATTCCTTGTTGGCACTCCCCGAAATCGGCACAAATTGGTAGTGCTTTTATTGAAGATTAGTTTAGTATTTATAGTTATACTTGCTCTTACTGGATCATTTTGGTGGACAATCTCAATTTCTACCTCATCAAGAGGTCACATTTACCATGGTTATAGAAGACTTCAAGAGAAACTTGTATCTGACCTGTTGGATATTGGGGAGTTTTCTCGTGGTTCCTCAAAGATGAAAGAATTAGAATTCTGTTCTCAGGAGTTCGAAAACTATGTTCCTTGCTTTAATGTCACTGAGAATCAAGCCTTGGGTTATTCTGGAAGTGATGAGTTTGACCGGCTATGTGGCCATGAGCTCAGGCAAAGTTGTTTAGTTCTCCCACCTGCAAATTACAAACTTCCACTTCGGTGGCCTACTGGAAGAGATGTTATCTGGATTGCCAATGTTAAAATCACAGCACAGGAGGTTCTCTCTTCAGGGAGCTTAACCAAGAGGATGATGATGCTGGATGAAGAGCAAATTTCCTTTCGTTCAGCCTCTCTTATGTTTGATGGTGTTGAAGATTACTCACATCAAATTGCAGAAATGATTGGACTTAGAAATGAATCTAACTTCATACAAGCTGGGGTTAGAACCATACTGGACATAGGTTGTGGATATGGTAGCTTTGGAGCACACCTCTATCACAGTCAGCTTCTAACTATGTGCATTGCAAACTATGAGCCTTCAGGTAGCCAAGTTCAGCTCACACTTGAGAGGGGTCTTCCTGCTATGATTGCTTCTTTCACTTCAACACAGTTGCCATATCCATCTCTTTCCTTTGATATGTTGCACTGTGCAAGATGTGGCATTGATTGGGACCAGAAAGATGGCATTCTCTTAATTGAAGCTGATAGACTTTTAAAACCGGGTGGCTATTTTGTCTGGACATCACCACTTACAAATGCTCGTAACAAAGAGAATCAGAAACGATGGGGATTTATCCATGATTTTACTGAAAATCTTTGCTGGGAAATGTTGTCACAGCAAGATGAAACAGTTGTGTGGAAGAAAACTATTAAAAGGAATTGCTATAATTCAAGAAAGCCTGGTTCTCGGCCGCCCTTGTGTATTAAAAGTCATGATGTGGAGTCTCCATATTATCGAGAACTGCAAAATTGCATAGGAGGAACACACAGCAGCCGTTGGATTTCTATTGAAGAGCGGGAGACCTGGCCTTCTCGGGCTAACTTGAACAACAAAGAGCTTGCTATCCATGGGTTACAGTCTGTAGAATTTTTTGAGGACTCTGAAATCTGGAGAATAGCAGTCCATAATTATTGGTCTCTTCTGTCACCTTTAATATTCTCTGATCACCCAAAACGGCCTGGCGAAGAGGACCCTCCACCACCTTATAACATGCTCAGGAATGTGCTTGACATGAATGCTCATTTTGGTGGTTTTAATTCTGCATTGTTGCAAGCTAGAAAGTCTGTGTGGGTGATGAATGTTGTTCCGACCAGTGGGCCCAACTACCTTCCATTGATCCAGGACAGGGGGTTTGTCGGTGTTTTACATGATTGGTGTGAGGCCTTTCCGACGTACCCTAGAACCTTTGATTTGGTACATGCAGCAGGACTTCTTTCCCAAAGCGCGACTCATCAACATAGATGCACTATGATTGACTTGTTCATCGAGATTGATAGATTACTTCGCCCAGAGGGTTGGATTATAATTCGTGACACAGTTCCTTTAATAGAAACTGCAAGAGCACTAACAGCACGGCTGAAGTGGGATGCACGAGTTGTAGAAATTGATAGTGACAGCGATAAGAGACTCCTGATCTGTCAAAAACCGTTCTATAAGAGACAGGCAAACTAA 2070 0.4208 MSRPLHRGVSRIPDSSPGLWDSQSKNKTEKEDFDRKGSSDQSSLGLKFPLRLLFADNSHSKYGITENGFTSDPFLVGTPRNRHKLVVLLLKISLVFIVILALTGSFWWTISISTSSRGHIYHGYRRLQEKLVSDLLDIGEFSRGSSKMKELEFCSQEFENYVPCFNVTENQALGYSGSDEFDRLCGHELRQSCLVLPPANYKLPLRWPTGRDVIWIANVKITAQEVLSSGSLTKRMMMLDEEQISFRSASLMFDGVEDYSHQIAEMIGLRNESNFIQAGVRTILDIGCGYGSFGAHLYHSQLLTMCIANYEPSGSQVQLTLERGLPAMIASFTSTQLPYPSLSFDMLHCARCGIDWDQKDGILLIEADRLLKPGGYFVWTSPLTNARNKENQKRWGFIHDFTENLCWEMLSQQDETVVWKKTIKRNCYNSRKPGSRPPLCIKSHDVESPYYRELQNCIGGTHSSRWISIEERETWPSRANLNNKELAIHGLQSVEFFEDSEIWRIAVHNYWSLLSPLIFSDHPKRPGEEDPPPPYNMLRNVLDMNAHFGGFNSALLQARKSVWVMNVVPTSGPNYLPLIQDRGFVGVLHDWCEAFPTYPRTFDLVHAAGLLSQSATHQHRCTMIDLFIEIDRLLRPEGWIIIRDTVPLIETARALTARLKWDARVVEIDSDSDKRLLICQKPFYKRQAN 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g2373 689 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 160 681 IPR004159 GO:0008168
Dere05g2373 689 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 539 648 IPR029063 -
Dere05g2373 689 FunFam probable pectin methyltransferase QUA2 242 422 - -
Dere05g2373 689 Gene3D Vaccinia Virus protein VP39 255 499 IPR029063 -
Dere05g2373 689 MobiDBLite consensus disorder prediction 1 43 - -
Dere05g2373 689 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 126 684 IPR004159 GO:0008168
Dere05g2373 689 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 278 427 IPR029063 -
Dere05g2373 689 MobiDBLite consensus disorder prediction 24 38 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g2373 Dere-ChrDere05 34108882 34114321 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g2373 05 34108882 34114321 Dere05g2373 05 34108882 34114321 ECH