Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g2366 ATGAATGAATTTGTAGACAGAATTGAAGCTAAAGATGTTGGTATCGACGAGTATGGGTCGAGTGATTCGGCGGAGGTCGGGGGTAGCAGGGGGTTGTATTGTGGACGAGGCTTCTCGGAGATTACATACATTCATATTCATGAATGTGAGAGTGTCTCTATAGGCATGTTCTGTTTCCCAGCAGGGAAGTTATTTCCACTTCATGATCACCCGGAGATGACAGTGCTAAGCAAACTCCTTTATGGCTCTGTTTATGTCAAAGCTTATGACTGGATCAAACTGGATACTACTGCCTGCCAAAAATGCAGGGTAATGGATGGAAAAATGGAAGCACCACATGAGGCAACCGTACTATTTCCAACAAGTGGAGGCAACATTCACGCTTTCACTGCCTTGACTCCCTGCGCTATTCTCGACGTTCTGTCCCCACCATACTCTGATCACTTGGGAAGGCCTTCCACTTACTTCTCTGACCTTCCTCTTCCTCCCCCTTCTCCTCCTGGTTACGCCATGCTTCAGGCAAAACCTCTGCCTGCAGACCTGGTAGTAAGAGGAGCACCATATCTTGGACCTCCTGTTGTGGACCAATACCACTCTTATCAGTAA 606 0.4736 MNEFVDRIEAKDVGIDEYGSSDSAEVGGSRGLYCGRGFSEITYIHIHECESVSIGMFCFPAGKLFPLHDHPEMTVLSKLLYGSVYVKAYDWIKLDTTACQKCRVMDGKMEAPHEATVLFPTSGGNIHAFTALTPCAILDVLSPPYSDHLGRPSTYFSDLPLPPPSPPGYAMLQAKPLPADLVVRGAPYLGPPVVDQYHSYQ 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g2366 201 CDD cupin_ADO 50 146 - -
Dere05g2366 201 PANTHER UNCHARACTERIZED 3 193 IPR012864 GO:0016702
Dere05g2366 201 Pfam PCO_ADO 5 193 IPR012864 GO:0016702
Dere05g2366 201 Gene3D Jelly Rolls 29 158 IPR014710 -
Dere05g2366 201 SUPERFAMILY RmlC-like cupins 40 156 IPR011051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g2366 Dere-ChrDere05 34021915 34024581 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g2366 05 34021915 34024581 Dere05g2366 05 34021915 34024581 ECH