Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g2359 ATGCAGAGGCGCAGGTGGATTCCATTGGTGCTCCTTCGGAAGTTGCTTACTGCAGCCATATGCTCAATTGCGTTTATGGCTCTCTTCTCTGTCCACGTTCACGTAGTCCCCTCTTCCAAAGATCAAAAGTTCAATGATAAGATCCCCACGCCTCGTGATAGGCAAAGCTGGACGCGAGAGCTCTCTCCGCCTCATTTATCCAAAGCTCCACTTCCTACCCCCAAGTTAAATAATGCAAGACGGGATTCAGACTATGACAAGCTGTGGAAGCCTCCATCAAATCGTGGTTTTCTGCCCTGCATAAATCCTACTCCTAATTACACAACTCCTGCCAAGTCTCAAGGTTACCTACTTGTTCACACAAACGGTGGGCTCAACCAAATGCGTGCTGGGATTTGTGACATGGTAGCTGTAGCTCGTATCATAAATGCTACTCTTGTAATTCCAGAACTTGATAAAAAGTCATTTTGGCAAGACAGTAGCAACTTCTCAGATATTTTTGATGAAGAGCATTTTATAAGTTCTCTAGCTAATGATGTAAAAATCATTAAGAAGCTTCCGAAAGAACTGGTTAATACTACCAGAATGGTCAAGCATTTCAGAAGTTGGTCTGGTATGGAATACTATGAGGATGAGATTGCTGGCTTGTGGGAAGAATACCAAGTTATCCGAGCTGCCAAGTCTGATTCTCGGTTAGCAAATAACCATTTACCTCCAGATATTCAGAAGCTTCGCTGCCGTGCTTGTTATGAAGCTCTCCGTTTCTCTCCGCGCATTGAACAAATGGGAAAATTGTTAGTGGAGAGGATGAGATCATTTGGCCCATATATTGCACTACATTTGCGTTATGAGAAGGATATGCTTGCATTTAGTGGGTGCACACATGATTTATCTCCAGCTGAGGCTGATGAGCTACGAATGACCAGAGAGAACACTTCCCATTGGAAAATAAAGGATATTGATCCCAGAGAACAGAGATCCAAAGGGTTTTGCCCGCTAACCCCAAAGGAAGTTGGCATTTTTCTTACTGCTCTTGGATACCCATCAAAGATTCCAATATATATTGCTGCTGGGGAGATATATGGGGGTGAATTGCATATGGCAGAACTGCGATCCCGCTATCCATTGTTAATGAGCAAGGAAAAATTGGCATCCATCCAGGAGCTTGAACCTTTTTTAAATCATGCTTCTCAAATGGCTGCTCTTGACTATATAGTATCTATTGAAAGTGATGTATTTATACCCTCTTACTCTGGAAATATGGCAAGGGCTGTTGAAGGTCATCGCCGTTTTCTCGGACGTGGCCGAACAATATCTCCAGACAGGAAAGCACTAGTTCGTCTGTTTGACAAACTGGATCAGGGAACAATGATCGAGGGGAACCCTCTAACAAGTAAGGTTATTGATCTCCACAGAAGAAGGCTTGGGTCCCCAAGAAAGAGAAAAGGGCCAATTTCTGGGACGAAGGGTATGGATAGATTTCGGTCAGAAGAAGCCTTTTATGCGAATCCTTTACCTGATTGTTTATGTCGGACAGAGTCACCCCATGTAAATGCCTCCCACGTACGTTCTTAG 1575 0.4375 MQRRRWIPLVLLRKLLTAAICSIAFMALFSVHVHVVPSSKDQKFNDKIPTPRDRQSWTRELSPPHLSKAPLPTPKLNNARRDSDYDKLWKPPSNRGFLPCINPTPNYTTPAKSQGYLLVHTNGGLNQMRAGICDMVAVARIINATLVIPELDKKSFWQDSSNFSDIFDEEHFISSLANDVKIIKKLPKELVNTTRMVKHFRSWSGMEYYEDEIAGLWEEYQVIRAAKSDSRLANNHLPPDIQKLRCRACYEALRFSPRIEQMGKLLVERMRSFGPYIALHLRYEKDMLAFSGCTHDLSPAEADELRMTRENTSHWKIKDIDPREQRSKGFCPLTPKEVGIFLTALGYPSKIPIYIAAGEIYGGELHMAELRSRYPLLMSKEKLASIQELEPFLNHASQMAALDYIVSIESDVFIPSYSGNMARAVEGHRRFLGRGRTISPDRKALVRLFDKLDQGTMIEGNPLTSKVIDLHRRRLGSPRKRKGPISGTKGMDRFRSEEAFYANPLPDCLCRTESPHVNASHVRS 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g2359 524 PANTHER OS02G0726500 PROTEIN-RELATED 13 511 - -
Dere05g2359 524 MobiDBLite consensus disorder prediction 40 77 - -
Dere05g2359 524 MobiDBLite consensus disorder prediction 40 54 - -
Dere05g2359 524 PIRSF UCP009360 1 514 IPR024709 -
Dere05g2359 524 Pfam GDP-fucose protein O-fucosyltransferase 116 431 IPR019378 -
Dere05g2359 524 CDD O-FucT_plant 116 437 IPR024709 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g2359 Dere-ChrDere05 33964266 33968775 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g2359 60 513 Miscellaneous Gene Families AT1G22460 68.943 0.0 681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g2359 05 33964266 33968775 Dere05g2359 05 33964266 33968775 ECH