Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g2352 ATGAGAACAAGAGGACCTAATCCTAACAACTCCATCTCCTCCATTATAAAAGCAAACCCATTCATCCACACTTTCTCAAGCCTCCTCTGTTTCCTTCTTTCTCATACAATGGCATTCTTCAACGCCATAATTTTGGGTGTATTTGTAGCAGTTAACATGGCGCTGCCAGCCCTAGCTAAAGTCTACACCGTTGGAGACACCTCTGGTTGGGCTATTGGTACTGATTATGGTACCTGGGCTTCCGGCAATACCTTCCAAGTTGGTGATTCCCTCGTGTTCAACTATGGAGCCGGGCACACCGTGGACGAAGTTAAAGAGAGTGACTACAAGTCCTGCACCACTGGGAATTCACTGACTTCAGACAGCAGTGGAGCCACTACCATTACCCTCAAGACTGCAGGCACCCACTACTTCCTATGTGCTATTCCTGGACATTGCACTGGTGGCATGAAGCTTGCCGTTGATGTTAAGGCAGCAAAAGCTTCTGCTCCCTCTGCTACGCCGTCGCCCGGCAAGGGCTCCCCCTCCGGCGACACCCCAGCCACCACCACCACTCCCTCCTCCTCATCTTCCACCACTCCATCCACATCCTCGAATACGTCTTCAGCCACTCTTCTTTCGCCAATTGTCGCTCTGTTGATTGTTTCCTGGGTTTCCAACTATGTGTCGTGCCTGCTATGA 681 0.5081 MRTRGPNPNNSISSIIKANPFIHTFSSLLCFLLSHTMAFFNAIILGVFVAVNMALPALAKVYTVGDTSGWAIGTDYGTWASGNTFQVGDSLVFNYGAGHTVDEVKESDYKSCTTGNSLTSDSSGATTITLKTAGTHYFLCAIPGHCTGGMKLAVDVKAAKASAPSATPSPGKGSPSGDTPATTTTPSSSSSTTPSTSSNTSSATLLSPIVALLIVSWVSNYVSCLL 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g2352 226 ProSitePatterns Type-1 copper (blue) proteins signature. 134 150 IPR028871 -
Dere05g2352 226 ProSiteProfiles Phytocyanin domain profile. 60 158 IPR003245 GO:0009055
Dere05g2352 226 PANTHER BLUE COPPER PROTEIN 59 175 IPR039391 GO:0009055
Dere05g2352 226 Pfam Plastocyanin-like domain 70 150 IPR003245 GO:0009055
Dere05g2352 226 Gene3D - 58 163 IPR008972 -
Dere05g2352 226 CDD Phytocyanin 60 156 - -
Dere05g2352 226 MobiDBLite consensus disorder prediction 163 202 - -
Dere05g2352 226 MobiDBLite consensus disorder prediction 167 202 - -
Dere05g2352 226 FunFam Blue copper 58 162 - -
Dere05g2352 226 SUPERFAMILY Cupredoxins 59 156 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g2352 Dere-ChrDere05 33838806 33839806 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g2352 44 156 Miscellaneous Gene Families AT1G22480 58.407 7.35e-37 125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g2352 05 33838806 33839806 Dere05g2352 05 33838806 33839806 ECH