Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g2338 ATGGGTCAGTTTGCGCAGATGTTAAACTCTTCAAAACCCCACAACCCTAAGACTCTGCCCGTCAATCCCTCTTATCATGCACTCTCTTCGTTTTCGTCCCCGTCCAGAATCAGTTTGAAGCCACGAAAGTTTTCGACTAGCTCTTCCTCGGTTATGCGAAGCCAAAACCAAAGAGAATCTCAACAACAGTTGTCTTTGGCGGAAGCTCTGCTCAATAGTGATCGCAAGGAAGAAGTTCTAGGCGACATTAGAAGCTCCCTCTTTAACTGCCTCTCCGAAACTAACCTTCATTTGACAATTCCTGGTCTCAAGTCAAAAACTAGAGGCAAGGTTAGAGATATTTATGACAGCGGAGACTATCTTGTTCTGGTGACAACTGATCGGCAGAGTGCATTTGACAGGATTCTTGCTTCTATACCTTTCAAAGGCCAGGTTCTCAACGAGACAAGTTTGTGGTGGTTTGAGAAAACTAAGAACATAACTTCCAATGCAGTTGTCTCAGCTCCGGATAAGAATGTTACAATTGCAAGAAAATGTTCGGTGTTCCCAGTTGAATTTGTTGTTAGAGGATATCTGACCGGAAGTACTGATACGTCTCTATGGACAGTTTACAATAAAGGCATCCGAAATTATTGTGGCAATGTTCTTCCAGATGGATTGGTAAAAAATCAAAAGCTGTCCGAAAATATACTCACACCAACAACCAAGGCTGCTGATCATGATGTTCCTGTAACTCCTGATGAGATTATTCAAAGTGGACTCATGACTCAAGCTGATTATGAACAAGCAAGCAGAAAAGCATTAAGCTTGTTTGAGTATGGACAGCATGTTGCTTTGGAACATGGCCTCATATTGGTGGACACAAAGTATGAATTCGGGAAGGCAAATGATGGCTCAATTCTTTTGATTGATGAGGTGCATACTCCTGATTCAAGTAGATATTGGATTGCCAATTCTTACATGGAACGCTTTCATAATGGTCTTGACCCAGAGAATGTTGATAAGGAGTTTTTGAGATTGTGGTTCAGAAGTCACTGCAACCCTTATGAAGACGAGGTCCTTCCTGATGCCCCTGAAGATCTTGTTTGTGAATTGGCTTGGCGATACATTTTCTTGTATGAGACTATAACACAATCAAAATTTGATGTGCTTTCCCCCGAGGAACCAATACATGACCGCATATCTCGAAATGTTGCATCTGCGCTATCATCTCTGAAGTAG 1221 0.4201 MGQFAQMLNSSKPHNPKTLPVNPSYHALSSFSSPSRISLKPRKFSTSSSSVMRSQNQRESQQQLSLAEALLNSDRKEEVLGDIRSSLFNCLSETNLHLTIPGLKSKTRGKVRDIYDSGDYLVLVTTDRQSAFDRILASIPFKGQVLNETSLWWFEKTKNITSNAVVSAPDKNVTIARKCSVFPVEFVVRGYLTGSTDTSLWTVYNKGIRNYCGNVLPDGLVKNQKLSENILTPTTKAADHDVPVTPDEIIQSGLMTQADYEQASRKALSLFEYGQHVALEHGLILVDTKYEFGKANDGSILLIDEVHTPDSSRYWIANSYMERFHNGLDPENVDKEFLRLWFRSHCNPYEDEVLPDAPEDLVCELAWRYIFLYETITQSKFDVLSPEEPIHDRISRNVASALSSLK 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g2338 406 ProSitePatterns SAICAR synthetase signature 1. 181 195 IPR018236 GO:0004639|GO:0006164
Dere05g2338 406 Gene3D Phosphorylase Kinase; domain 1 92 182 - -
Dere05g2338 406 FunFam Phosphoribosylaminoimidazole-succinocarboxamide synthase 181 330 - -
Dere05g2338 406 Hamap Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 103 396 IPR028923 -
Dere05g2338 406 SUPERFAMILY SAICAR synthase-like 96 381 - -
Dere05g2338 406 ProSitePatterns SAICAR synthetase signature 2. 285 293 IPR018236 GO:0004639|GO:0006164
Dere05g2338 406 FunFam Phosphoribosylaminoimidazole-succinocarboxamide synthase 93 185 - -
Dere05g2338 406 Pfam SAICAR synthetase 107 352 IPR028923 -
Dere05g2338 406 Gene3D - 183 326 - -
Dere05g2338 406 PANTHER PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE SYNTHASE 37 402 - -
Dere05g2338 406 MobiDBLite consensus disorder prediction 1 60 - -
Dere05g2338 406 CDD SAICAR_synt_Sc 108 377 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g2338 05 33732634 33738437 Dere05g2338 05 33732634 33738437 ECH